Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
XPAP23025 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.64■□□□□ 0.25
XPAP23025 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.64■□□□□ 0.25
XPAP23025 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.64■□□□□ 0.25
XPAP23025 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.64■□□□□ 0.25
XPAP23025 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.64■□□□□ 0.25
XPAP23025 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.64■□□□□ 0.25
XPAP23025 AC020765.3-201ENST00000613051 740 ntBASIC16.64■□□□□ 0.25
XPAP23025 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
XPAP23025 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.64■□□□□ 0.25
XPAP23025 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
XPAP23025 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
XPAP23025 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
XPAP23025 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.63■□□□□ 0.25
XPAP23025 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
XPAP23025 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.63■□□□□ 0.25
XPAP23025 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.63■□□□□ 0.25
XPAP23025 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.63■□□□□ 0.25
XPAP23025 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.63■□□□□ 0.25
XPAP23025 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
XPAP23025 AC069335.1-201ENST00000489972 472 ntBASIC16.63■□□□□ 0.25
XPAP23025 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.63■□□□□ 0.25
XPAP23025 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
XPAP23025 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.63■□□□□ 0.25
XPAP23025 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.63■□□□□ 0.25
XPAP23025 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.63■□□□□ 0.25
XPAP23025 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.63■□□□□ 0.25
XPAP23025 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.63■□□□□ 0.25
XPAP23025 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
XPAP23025 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
XPAP23025 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
XPAP23025 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
XPAP23025 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.62■□□□□ 0.25
XPAP23025 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
XPAP23025 AL512652.2-201ENST00000625156 1716 ntBASIC16.62■□□□□ 0.25
XPAP23025 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
XPAP23025 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
XPAP23025 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.62■□□□□ 0.25
XPAP23025 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.62■□□□□ 0.25
XPAP23025 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
XPAP23025 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.62■□□□□ 0.25
XPAP23025 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 PRYP6-201ENST00000514804 343 ntBASIC16.62■□□□□ 0.25
XPAP23025 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 AC025678.2-201ENST00000562061 970 ntBASIC16.62■□□□□ 0.25
XPAP23025 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.62■□□□□ 0.25
XPAP23025 LINC00628-201ENST00000628516 1289 ntBASIC16.62■□□□□ 0.25
XPAP23025 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.62■□□□□ 0.25
XPAP23025 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.62■□□□□ 0.25
XPAP23025 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.62■□□□□ 0.25
XPAP23025 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
XPAP23025 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
XPAP23025 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.62■□□□□ 0.25
XPAP23025 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
XPAP23025 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms