Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PTPN1P18031 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.43■□□□□ 0.38
PTPN1P18031 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
PTPN1P18031 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.43■□□□□ 0.38
PTPN1P18031 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.43■□□□□ 0.38
PTPN1P18031 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.43■□□□□ 0.38
PTPN1P18031 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 Z92544.3-201ENST00000624747 417 ntBASIC17.43■□□□□ 0.38
PTPN1P18031 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN1P18031 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN1P18031 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PTPN1P18031 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.43■□□□□ 0.38
PTPN1P18031 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN1P18031 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN1P18031 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PTPN1P18031 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN1P18031 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
PTPN1P18031 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PTPN1P18031 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN1P18031 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN1P18031 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN1P18031 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PTPN1P18031 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PTPN1P18031 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PTPN1P18031 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPN1P18031 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPN1P18031 AC069262.1-201ENST00000539058 672 ntBASIC17.42■□□□□ 0.38
PTPN1P18031 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN1P18031 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.42■□□□□ 0.38
PTPN1P18031 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN1P18031 RARRES2P9-201ENST00000565168 469 ntBASIC17.42■□□□□ 0.38
PTPN1P18031 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN1P18031 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PTPN1P18031 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN1P18031 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN1P18031 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.42■□□□□ 0.38
PTPN1P18031 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PTPN1P18031 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PTPN1P18031 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.42■□□□□ 0.38
PTPN1P18031 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 AL139384.1-201ENST00000612143 3047 ntBASIC17.42■□□□□ 0.38
PTPN1P18031 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTPN1P18031 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.41■□□□□ 0.38
PTPN1P18031 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN1P18031 ALOX12P2-203ENST00000570921 1945 ntBASIC17.41■□□□□ 0.38
PTPN1P18031 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PTPN1P18031 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN1P18031 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN1P18031 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.41■□□□□ 0.38
PTPN1P18031 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 RFPL4AP1-201ENST00000530883 850 ntBASIC17.41■□□□□ 0.38
PTPN1P18031 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.41■□□□□ 0.38
PTPN1P18031 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PTPN1P18031 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN1P18031 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN1P18031 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN1P18031 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.41■□□□□ 0.38
PTPN1P18031 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.41■□□□□ 0.38
PTPN1P18031 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PTPN1P18031 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms