Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACANP16112 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACANP16112 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACANP16112 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.34□□□□□ -0.27
ACANP16112 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.34□□□□□ -0.27
ACANP16112 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACANP16112 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ACANP16112 AC091804.1-201ENST00000486888 567 ntBASIC13.34□□□□□ -0.27
ACANP16112 SCARNA20.5-201ENST00000516991 142 ntBASIC13.34□□□□□ -0.27
ACANP16112 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.34□□□□□ -0.27
ACANP16112 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.34□□□□□ -0.27
ACANP16112 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.34□□□□□ -0.27
ACANP16112 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
ACANP16112 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.34□□□□□ -0.27
ACANP16112 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ACANP16112 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACANP16112 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ACANP16112 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACANP16112 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACANP16112 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.34□□□□□ -0.27
ACANP16112 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.33□□□□□ -0.27
ACANP16112 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.33□□□□□ -0.27
ACANP16112 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
ACANP16112 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
ACANP16112 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
ACANP16112 AL442647.2-201ENST00000429864 857 ntBASIC13.33□□□□□ -0.27
ACANP16112 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC13.33□□□□□ -0.27
ACANP16112 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.33□□□□□ -0.27
ACANP16112 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.33□□□□□ -0.27
ACANP16112 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.27
ACANP16112 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.33□□□□□ -0.27
ACANP16112 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.33□□□□□ -0.27
ACANP16112 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.33□□□□□ -0.27
ACANP16112 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.33□□□□□ -0.27
ACANP16112 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.33□□□□□ -0.27
ACANP16112 AC005702.4-201ENST00000618393 416 ntBASIC13.33□□□□□ -0.27
ACANP16112 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
ACANP16112 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
ACANP16112 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ACANP16112 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC13.33□□□□□ -0.28
ACANP16112 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.33□□□□□ -0.28
ACANP16112 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC13.33□□□□□ -0.28
ACANP16112 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ACANP16112 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 AC098818.2-201ENST00000564925 2320 ntBASIC13.33□□□□□ -0.28
ACANP16112 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
ACANP16112 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.33□□□□□ -0.28
ACANP16112 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ACANP16112 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.33□□□□□ -0.28
ACANP16112 AL662890.1-201ENST00000396818 632 ntBASIC13.33□□□□□ -0.28
ACANP16112 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.33□□□□□ -0.28
ACANP16112 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.33□□□□□ -0.28
ACANP16112 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
ACANP16112 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.33□□□□□ -0.28
ACANP16112 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.33□□□□□ -0.28
ACANP16112 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.33□□□□□ -0.28
ACANP16112 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.33□□□□□ -0.28
ACANP16112 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ACANP16112 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
ACANP16112 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.33□□□□□ -0.28
ACANP16112 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.33□□□□□ -0.28
ACANP16112 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
ACANP16112 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
ACANP16112 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ACANP16112 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACANP16112 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ACANP16112 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACANP16112 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.32□□□□□ -0.28
ACANP16112 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.32□□□□□ -0.28
ACANP16112 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ACANP16112 ACTG1P3-201ENST00000431775 1114 ntBASIC13.32□□□□□ -0.28
ACANP16112 UPF3AP2-201ENST00000457924 1132 ntBASIC13.32□□□□□ -0.28
ACANP16112 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ACANP16112 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.32□□□□□ -0.28
ACANP16112 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC13.32□□□□□ -0.28
ACANP16112 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACANP16112 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.32□□□□□ -0.28
ACANP16112 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ACANP16112 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACANP16112 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACANP16112 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ACANP16112 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.32□□□□□ -0.28
ACANP16112 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ACANP16112 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ACANP16112 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms