Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CFTRP13569 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC27.64■■■□□ 2.02
CFTRP13569 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
CFTRP13569 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC27.64■■■□□ 2.02
CFTRP13569 AC105129.2-201ENST00000559536 390 ntBASIC27.64■■■□□ 2.02
CFTRP13569 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC27.64■■■□□ 2.02
CFTRP13569 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC27.64■■■□□ 2.02
CFTRP13569 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC27.64■■■□□ 2.02
CFTRP13569 AL008638.5-201ENST00000623814 1298 ntBASIC27.64■■■□□ 2.02
CFTRP13569 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC27.64■■■□□ 2.02
CFTRP13569 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CFTRP13569 GGT3P-204ENST00000453783 1664 ntBASIC27.64■■■□□ 2.02
CFTRP13569 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
CFTRP13569 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
CFTRP13569 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC27.64■■■□□ 2.02
CFTRP13569 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.02
CFTRP13569 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
CFTRP13569 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CFTRP13569 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CFTRP13569 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CFTRP13569 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
CFTRP13569 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CFTRP13569 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.01
CFTRP13569 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
CFTRP13569 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
CFTRP13569 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
CFTRP13569 AC007969.1-201ENST00000433675 447 ntBASIC27.64■■■□□ 2.01
CFTRP13569 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC27.64■■■□□ 2.01
CFTRP13569 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC27.64■■■□□ 2.01
CFTRP13569 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC27.64■■■□□ 2.01
CFTRP13569 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC27.64■■■□□ 2.01
CFTRP13569 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CFTRP13569 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC27.64■■■□□ 2.01
CFTRP13569 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC27.64■■■□□ 2.01
CFTRP13569 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
CFTRP13569 AC134043.2-201ENST00000624206 2238 ntBASIC27.63■■■□□ 2.01
CFTRP13569 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC27.63■■■□□ 2.01
CFTRP13569 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC27.63■■■□□ 2.01
CFTRP13569 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFTRP13569 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC27.63■■■□□ 2.01
CFTRP13569 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFTRP13569 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC27.63■■■□□ 2.01
CFTRP13569 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFTRP13569 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC27.63■■■□□ 2.01
CFTRP13569 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFTRP13569 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CFTRP13569 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC27.63■■■□□ 2.01
CFTRP13569 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFTRP13569 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC27.63■■■□□ 2.01
CFTRP13569 MIR663B-201ENST00000408361 115 ntBASIC27.63■■■□□ 2.01
CFTRP13569 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC27.63■■■□□ 2.01
CFTRP13569 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC27.63■■■□□ 2.01
CFTRP13569 KLK3-211ENST00000597483 810 ntTSL 2 BASIC27.63■■■□□ 2.01
CFTRP13569 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC27.63■■■□□ 2.01
CFTRP13569 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC27.63■■■□□ 2.01
CFTRP13569 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC27.63■■■□□ 2.01
CFTRP13569 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
CFTRP13569 LARP4-220ENST00000615080 856 ntTSL 5 BASIC27.63■■■□□ 2.01
CFTRP13569 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
CFTRP13569 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFTRP13569 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
CFTRP13569 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC27.62■■■□□ 2.01
CFTRP13569 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFTRP13569 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CFTRP13569 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC27.62■■■□□ 2.01
CFTRP13569 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFTRP13569 AC005622.1-201ENST00000636801 1703 ntBASIC27.62■■■□□ 2.01
CFTRP13569 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC27.62■■■□□ 2.01
CFTRP13569 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CFTRP13569 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC27.62■■■□□ 2.01
CFTRP13569 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFTRP13569 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CFTRP13569 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
CFTRP13569 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC27.62■■■□□ 2.01
CFTRP13569 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC27.62■■■□□ 2.01
CFTRP13569 AC091804.1-201ENST00000486888 567 ntBASIC27.62■■■□□ 2.01
CFTRP13569 PFN2-215ENST00000497148 743 ntTSL 4 BASIC27.62■■■□□ 2.01
CFTRP13569 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC27.62■■■□□ 2.01
CFTRP13569 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC27.62■■■□□ 2.01
CFTRP13569 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFTRP13569 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC27.62■■■□□ 2.01
CFTRP13569 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
CFTRP13569 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC27.62■■■□□ 2.01
CFTRP13569 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC27.61■■■□□ 2.01
CFTRP13569 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
CFTRP13569 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CFTRP13569 AL607033.1-201ENST00000623900 1599 ntBASIC27.61■■■□□ 2.01
CFTRP13569 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC27.61■■■□□ 2.01
CFTRP13569 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
CFTRP13569 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
CFTRP13569 TEX30-203ENST00000376022 828 ntTSL 2 BASIC27.61■■■□□ 2.01
CFTRP13569 SLC25A24P2-201ENST00000415059 510 ntBASIC27.61■■■□□ 2.01
CFTRP13569 OARD1-212ENST00000482515 832 ntTSL 2 BASIC27.61■■■□□ 2.01
CFTRP13569 AC025279.2-201ENST00000569730 653 ntBASIC27.61■■■□□ 2.01
CFTRP13569 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC27.61■■■□□ 2.01
CFTRP13569 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC27.61■■■□□ 2.01
CFTRP13569 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC27.61■■■□□ 2.01
CFTRP13569 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
CFTRP13569 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC27.61■■■□□ 2.01
CFTRP13569 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms