Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.96□□□□□ -0.02
FREM3P0C091 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FREM3P0C091 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FREM3P0C091 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FREM3P0C091 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
FREM3P0C091 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.96□□□□□ -0.02
FREM3P0C091 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
FREM3P0C091 AC073439.1-201ENST00000624121 1774 ntBASIC14.96□□□□□ -0.02
FREM3P0C091 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.96□□□□□ -0.02
FREM3P0C091 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
FREM3P0C091 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
FREM3P0C091 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.95□□□□□ -0.02
FREM3P0C091 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.95□□□□□ -0.02
FREM3P0C091 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
FREM3P0C091 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.95□□□□□ -0.02
FREM3P0C091 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.95□□□□□ -0.02
FREM3P0C091 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.95□□□□□ -0.02
FREM3P0C091 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
FREM3P0C091 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.95□□□□□ -0.02
FREM3P0C091 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.95□□□□□ -0.02
FREM3P0C091 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
FREM3P0C091 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.95□□□□□ -0.02
FREM3P0C091 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.95□□□□□ -0.02
FREM3P0C091 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
FREM3P0C091 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
FREM3P0C091 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 AL391256.1-201ENST00000443260 1855 ntBASIC14.95□□□□□ -0.02
FREM3P0C091 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
FREM3P0C091 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
FREM3P0C091 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
FREM3P0C091 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.95□□□□□ -0.02
FREM3P0C091 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
FREM3P0C091 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 AC109635.5-201ENST00000533593 962 ntBASIC14.95□□□□□ -0.02
FREM3P0C091 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
FREM3P0C091 MIR4453-201ENST00000584019 89 ntBASIC14.95□□□□□ -0.02
FREM3P0C091 AC004835.2-201ENST00000603762 682 ntBASIC14.95□□□□□ -0.02
FREM3P0C091 AL096865.1-201ENST00000606796 927 ntBASIC14.95□□□□□ -0.02
FREM3P0C091 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.95□□□□□ -0.02
FREM3P0C091 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.95□□□□□ -0.02
FREM3P0C091 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.95□□□□□ -0.02
FREM3P0C091 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.94□□□□□ -0.02
FREM3P0C091 AC005052.1-201ENST00000625181 2492 ntBASIC14.94□□□□□ -0.02
FREM3P0C091 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.94□□□□□ -0.02
FREM3P0C091 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.94□□□□□ -0.02
FREM3P0C091 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
FREM3P0C091 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
FREM3P0C091 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.94□□□□□ -0.02
FREM3P0C091 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
FREM3P0C091 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
FREM3P0C091 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.94□□□□□ -0.02
FREM3P0C091 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
FREM3P0C091 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
FREM3P0C091 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 AC005237.2-201ENST00000434368 219 ntBASIC14.94□□□□□ -0.02
FREM3P0C091 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.94□□□□□ -0.02
FREM3P0C091 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.94□□□□□ -0.02
FREM3P0C091 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
FREM3P0C091 ALG1L8P-201ENST00000533887 760 ntBASIC14.94□□□□□ -0.02
FREM3P0C091 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.94□□□□□ -0.02
FREM3P0C091 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.94□□□□□ -0.02
FREM3P0C091 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.94□□□□□ -0.02
FREM3P0C091 MIR6080-201ENST00000617359 66 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms