Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-DQB1P01920 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 AC013726.1-201ENST00000563747 2285 ntBASIC14.26□□□□□ -0.13
HLA-DQB1P01920 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 AC009533.2-201ENST00000543664 586 ntBASIC14.26□□□□□ -0.13
HLA-DQB1P01920 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 AC083849.1-201ENST00000615227 514 ntBASIC14.26□□□□□ -0.13
HLA-DQB1P01920 AC124864.1-201ENST00000623408 392 ntBASIC14.26□□□□□ -0.13
HLA-DQB1P01920 PGM5P2-202ENST00000637225 1043 ntBASIC14.26□□□□□ -0.13
HLA-DQB1P01920 AC066615.1-201ENST00000640911 628 ntBASIC14.26□□□□□ -0.13
HLA-DQB1P01920 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 AC005912.2-201ENST00000619492 2400 ntBASIC14.26□□□□□ -0.13
HLA-DQB1P01920 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 AC148477.5-201ENST00000625164 1645 ntBASIC14.26□□□□□ -0.13
HLA-DQB1P01920 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HLA-DQB1P01920 LINC00552-201ENST00000625151 2579 ntBASIC14.26□□□□□ -0.13
HLA-DQB1P01920 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms