Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 HMGA1P7-201ENST00000406908 502 ntBASIC16.62■□□□□ 0.25
VAPBO95292 IGLL3P-201ENST00000412472 434 ntBASIC16.62■□□□□ 0.25
VAPBO95292 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VAPBO95292 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.62■□□□□ 0.25
VAPBO95292 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.62■□□□□ 0.25
VAPBO95292 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.62■□□□□ 0.25
VAPBO95292 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.62■□□□□ 0.25
VAPBO95292 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
VAPBO95292 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
VAPBO95292 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VAPBO95292 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
VAPBO95292 AC132872.4-202ENST00000622924 2756 ntBASIC16.61■□□□□ 0.25
VAPBO95292 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VAPBO95292 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.61■□□□□ 0.25
VAPBO95292 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.61■□□□□ 0.25
VAPBO95292 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VAPBO95292 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.61■□□□□ 0.25
VAPBO95292 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VAPBO95292 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.61■□□□□ 0.25
VAPBO95292 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
VAPBO95292 AC020765.3-201ENST00000613051 740 ntBASIC16.61■□□□□ 0.25
VAPBO95292 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.61■□□□□ 0.25
VAPBO95292 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
VAPBO95292 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.61■□□□□ 0.25
VAPBO95292 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VAPBO95292 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
VAPBO95292 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VAPBO95292 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.61■□□□□ 0.25
VAPBO95292 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VAPBO95292 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
VAPBO95292 AC006449.6-201ENST00000612330 2296 ntBASIC16.61■□□□□ 0.25
VAPBO95292 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VAPBO95292 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
VAPBO95292 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.6■□□□□ 0.25
VAPBO95292 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
VAPBO95292 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.6■□□□□ 0.25
VAPBO95292 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.6■□□□□ 0.25
VAPBO95292 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 AC022188.1-201ENST00000620960 1664 ntBASIC16.6■□□□□ 0.25
VAPBO95292 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
VAPBO95292 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.6■□□□□ 0.25
VAPBO95292 RNU1-129P-201ENST00000384064 167 ntBASIC16.6■□□□□ 0.25
VAPBO95292 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
VAPBO95292 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.6■□□□□ 0.25
VAPBO95292 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VAPBO95292 POU5F1P6-201ENST00000466990 990 ntBASIC16.6■□□□□ 0.25
VAPBO95292 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.6■□□□□ 0.25
VAPBO95292 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.6■□□□□ 0.25
VAPBO95292 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.6■□□□□ 0.25
VAPBO95292 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 U1.21-201ENST00000580816 167 ntBASIC16.6■□□□□ 0.25
VAPBO95292 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.6■□□□□ 0.25
VAPBO95292 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.6■□□□□ 0.25
VAPBO95292 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.6■□□□□ 0.25
VAPBO95292 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.6■□□□□ 0.25
VAPBO95292 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.6■□□□□ 0.25
VAPBO95292 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.6■□□□□ 0.25
VAPBO95292 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
VAPBO95292 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.6■□□□□ 0.25
VAPBO95292 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.6■□□□□ 0.25
VAPBO95292 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.6■□□□□ 0.25
VAPBO95292 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VAPBO95292 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
VAPBO95292 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
VAPBO95292 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
VAPBO95292 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
VAPBO95292 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.59■□□□□ 0.25
VAPBO95292 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VAPBO95292 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms