Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL3O95164 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBL3O95164 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
UBL3O95164 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
UBL3O95164 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.86□□□□□ -0.03
UBL3O95164 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBL3O95164 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
UBL3O95164 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL3O95164 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL3O95164 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBL3O95164 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.86□□□□□ -0.03
UBL3O95164 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.86□□□□□ -0.03
UBL3O95164 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBL3O95164 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
UBL3O95164 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL3O95164 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.86□□□□□ -0.03
UBL3O95164 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL3O95164 AC006538.1-201ENST00000567905 1585 ntBASIC14.85□□□□□ -0.03
UBL3O95164 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.85□□□□□ -0.03
UBL3O95164 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.85□□□□□ -0.03
UBL3O95164 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.85□□□□□ -0.03
UBL3O95164 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.85□□□□□ -0.03
UBL3O95164 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
UBL3O95164 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.85□□□□□ -0.03
UBL3O95164 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.85□□□□□ -0.03
UBL3O95164 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
UBL3O95164 AC009947.1-201ENST00000444350 727 ntBASIC14.85□□□□□ -0.03
UBL3O95164 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.85□□□□□ -0.03
UBL3O95164 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.85□□□□□ -0.03
UBL3O95164 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.85□□□□□ -0.03
UBL3O95164 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.85□□□□□ -0.03
UBL3O95164 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UBL3O95164 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
UBL3O95164 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.85□□□□□ -0.03
UBL3O95164 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.85□□□□□ -0.03
UBL3O95164 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 AC120114.3-201ENST00000611923 658 ntBASIC14.85□□□□□ -0.03
UBL3O95164 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
UBL3O95164 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.85□□□□□ -0.03
UBL3O95164 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
UBL3O95164 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UBL3O95164 AC129492.6-201ENST00000611383 1305 ntBASIC14.85□□□□□ -0.03
UBL3O95164 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.85□□□□□ -0.03
UBL3O95164 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.85□□□□□ -0.03
UBL3O95164 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UBL3O95164 ZNF259P1-201ENST00000407656 1365 ntBASIC14.85□□□□□ -0.03
UBL3O95164 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL3O95164 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
UBL3O95164 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.84□□□□□ -0.03
UBL3O95164 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.84□□□□□ -0.03
UBL3O95164 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.84□□□□□ -0.03
UBL3O95164 AC126177.1-201ENST00000547829 2218 ntBASIC14.84□□□□□ -0.03
UBL3O95164 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
UBL3O95164 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.84□□□□□ -0.03
UBL3O95164 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.84□□□□□ -0.03
UBL3O95164 AC145285.3-201ENST00000564603 959 ntBASIC14.84□□□□□ -0.03
UBL3O95164 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.84□□□□□ -0.03
UBL3O95164 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.84□□□□□ -0.03
UBL3O95164 AC004790.2-201ENST00000623588 572 ntBASIC14.84□□□□□ -0.03
UBL3O95164 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.84□□□□□ -0.03
UBL3O95164 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
UBL3O95164 AC002310.6-201ENST00000624451 1377 ntBASIC14.84□□□□□ -0.03
UBL3O95164 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL3O95164 AC104109.2-201ENST00000602919 1418 ntBASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms