Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.67■□□□□ 0.1
SCN2BO60939 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SCN2BO60939 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 AL356488.2-201ENST00000602755 427 ntBASIC15.67■□□□□ 0.1
SCN2BO60939 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SCN2BO60939 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SCN2BO60939 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SCN2BO60939 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.67■□□□□ 0.1
SCN2BO60939 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SCN2BO60939 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.67■□□□□ 0.1
SCN2BO60939 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.66■□□□□ 0.1
SCN2BO60939 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.66■□□□□ 0.1
SCN2BO60939 AP002414.3-201ENST00000589352 1468 ntBASIC15.66■□□□□ 0.1
SCN2BO60939 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.66■□□□□ 0.1
SCN2BO60939 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SCN2BO60939 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.66■□□□□ 0.1
SCN2BO60939 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SCN2BO60939 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SCN2BO60939 KRT18P56-201ENST00000507275 550 ntBASIC15.66■□□□□ 0.1
SCN2BO60939 AC073648.2-201ENST00000510116 352 ntBASIC15.66■□□□□ 0.1
SCN2BO60939 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.66■□□□□ 0.1
SCN2BO60939 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SCN2BO60939 AC105339.3-201ENST00000560043 636 ntBASIC15.66■□□□□ 0.1
SCN2BO60939 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.66■□□□□ 0.1
SCN2BO60939 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCN2BO60939 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SCN2BO60939 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SCN2BO60939 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.65■□□□□ 0.1
SCN2BO60939 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SCN2BO60939 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.65■□□□□ 0.1
SCN2BO60939 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.65■□□□□ 0.1
SCN2BO60939 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.65■□□□□ 0.1
SCN2BO60939 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.65■□□□□ 0.1
SCN2BO60939 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.65■□□□□ 0.1
SCN2BO60939 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.65■□□□□ 0.1
SCN2BO60939 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.65■□□□□ 0.1
SCN2BO60939 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SCN2BO60939 ACTL9-202ENST00000612068 1252 ntBASIC15.65■□□□□ 0.1
SCN2BO60939 AC020765.3-201ENST00000613051 740 ntBASIC15.65■□□□□ 0.1
SCN2BO60939 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SCN2BO60939 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SCN2BO60939 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.65■□□□□ 0.1
SCN2BO60939 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.65■□□□□ 0.1
SCN2BO60939 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCN2BO60939 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.65■□□□□ 0.1
SCN2BO60939 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms