Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNQ3O43525 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNQ3O43525 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNQ3O43525 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.97■□□□□ 0.95
KCNQ3O43525 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNQ3O43525 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.97■□□□□ 0.95
KCNQ3O43525 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
KCNQ3O43525 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNQ3O43525 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC20.97■□□□□ 0.95
KCNQ3O43525 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KCNQ3O43525 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNQ3O43525 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.97■□□□□ 0.95
KCNQ3O43525 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.97■□□□□ 0.95
KCNQ3O43525 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KCNQ3O43525 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.97■□□□□ 0.95
KCNQ3O43525 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
KCNQ3O43525 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.97■□□□□ 0.95
KCNQ3O43525 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KCNQ3O43525 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNQ3O43525 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.97■□□□□ 0.95
KCNQ3O43525 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNQ3O43525 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.96■□□□□ 0.95
KCNQ3O43525 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.96■□□□□ 0.95
KCNQ3O43525 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 ALOX12P2-203ENST00000570921 1945 ntBASIC20.96■□□□□ 0.95
KCNQ3O43525 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
KCNQ3O43525 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 MEIS3P1-201ENST00000495167 958 ntBASIC20.96■□□□□ 0.95
KCNQ3O43525 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.96■□□□□ 0.95
KCNQ3O43525 TP53TG3HP-202ENST00000569755 579 ntBASIC20.96■□□□□ 0.95
KCNQ3O43525 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
KCNQ3O43525 AC004461.2-201ENST00000629517 803 ntBASIC20.96■□□□□ 0.95
KCNQ3O43525 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.96■□□□□ 0.95
KCNQ3O43525 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
KCNQ3O43525 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.96■□□□□ 0.95
KCNQ3O43525 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC20.96■□□□□ 0.95
KCNQ3O43525 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.96■□□□□ 0.95
KCNQ3O43525 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KCNQ3O43525 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.96■□□□□ 0.95
KCNQ3O43525 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.95■□□□□ 0.95
KCNQ3O43525 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC20.95■□□□□ 0.95
KCNQ3O43525 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
KCNQ3O43525 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNQ3O43525 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.95■□□□□ 0.94
KCNQ3O43525 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
KCNQ3O43525 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNQ3O43525 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
KCNQ3O43525 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
KCNQ3O43525 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNQ3O43525 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNQ3O43525 SPDYE19P-201ENST00000338590 713 ntBASIC20.95■□□□□ 0.94
KCNQ3O43525 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNQ3O43525 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.95■□□□□ 0.94
KCNQ3O43525 HIST3H2BA-201ENST00000436555 524 ntBASIC20.95■□□□□ 0.94
KCNQ3O43525 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.95■□□□□ 0.94
KCNQ3O43525 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNQ3O43525 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC20.95■□□□□ 0.94
KCNQ3O43525 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
KCNQ3O43525 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNQ3O43525 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
KCNQ3O43525 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC20.95■□□□□ 0.94
KCNQ3O43525 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC20.95■□□□□ 0.94
KCNQ3O43525 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.95■□□□□ 0.94
KCNQ3O43525 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNQ3O43525 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
KCNQ3O43525 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
KCNQ3O43525 AGGF1P2-201ENST00000426656 2106 ntBASIC20.95■□□□□ 0.94
KCNQ3O43525 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KCNQ3O43525 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC20.95■□□□□ 0.94
KCNQ3O43525 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNQ3O43525 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC20.94■□□□□ 0.94
KCNQ3O43525 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.94■□□□□ 0.94
KCNQ3O43525 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.94■□□□□ 0.94
KCNQ3O43525 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNQ3O43525 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.94■□□□□ 0.94
KCNQ3O43525 AC114501.2-201ENST00000439631 535 ntBASIC20.94■□□□□ 0.94
KCNQ3O43525 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNQ3O43525 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.94■□□□□ 0.94
KCNQ3O43525 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
KCNQ3O43525 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.94■□□□□ 0.94
KCNQ3O43525 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC20.94■□□□□ 0.94
KCNQ3O43525 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.94■□□□□ 0.94
KCNQ3O43525 AL109936.8-201ENST00000641772 604 ntBASIC20.94■□□□□ 0.94
KCNQ3O43525 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNQ3O43525 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
KCNQ3O43525 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
KCNQ3O43525 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
KCNQ3O43525 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms