Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.35□□□□□ -0.59
NDUFA1O15239 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.35□□□□□ -0.59
NDUFA1O15239 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 PC-204ENST00000524491 1714 ntTSL 2 BASIC11.35□□□□□ -0.59
NDUFA1O15239 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
NDUFA1O15239 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.35□□□□□ -0.59
NDUFA1O15239 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.35□□□□□ -0.59
NDUFA1O15239 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.35□□□□□ -0.59
NDUFA1O15239 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.35□□□□□ -0.59
NDUFA1O15239 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.35□□□□□ -0.59
NDUFA1O15239 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.35□□□□□ -0.59
NDUFA1O15239 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC11.35□□□□□ -0.59
NDUFA1O15239 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.35□□□□□ -0.59
NDUFA1O15239 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC11.35□□□□□ -0.59
NDUFA1O15239 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC11.35□□□□□ -0.59
NDUFA1O15239 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.35□□□□□ -0.59
NDUFA1O15239 NTF6B-201ENST00000591913 560 ntBASIC11.35□□□□□ -0.59
NDUFA1O15239 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.35□□□□□ -0.59
NDUFA1O15239 AL121956.5-201ENST00000625261 221 ntBASIC11.35□□□□□ -0.59
NDUFA1O15239 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.35□□□□□ -0.59
NDUFA1O15239 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
NDUFA1O15239 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
NDUFA1O15239 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC11.35□□□□□ -0.59
NDUFA1O15239 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.35□□□□□ -0.59
NDUFA1O15239 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
NDUFA1O15239 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.35□□□□□ -0.59
NDUFA1O15239 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 AC097376.2-205ENST00000610159 5334 ntBASIC11.35□□□□□ -0.59
NDUFA1O15239 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.35□□□□□ -0.59
NDUFA1O15239 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
NDUFA1O15239 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.35□□□□□ -0.59
NDUFA1O15239 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
NDUFA1O15239 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.35□□□□□ -0.59
NDUFA1O15239 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC11.35□□□□□ -0.59
NDUFA1O15239 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11.35□□□□□ -0.59
NDUFA1O15239 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
NDUFA1O15239 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.34□□□□□ -0.59
NDUFA1O15239 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC11.34□□□□□ -0.59
NDUFA1O15239 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 AC013268.4-201ENST00000637413 2228 ntBASIC11.34□□□□□ -0.59
NDUFA1O15239 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.34□□□□□ -0.59
NDUFA1O15239 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11.34□□□□□ -0.59
NDUFA1O15239 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.34□□□□□ -0.59
NDUFA1O15239 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
NDUFA1O15239 AC011467.2-201ENST00000598425 242 ntBASIC11.34□□□□□ -0.59
NDUFA1O15239 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.34□□□□□ -0.59
NDUFA1O15239 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.34□□□□□ -0.59
NDUFA1O15239 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC11.34□□□□□ -0.59
NDUFA1O15239 AC073592.5-201ENST00000624854 528 ntBASIC11.34□□□□□ -0.59
NDUFA1O15239 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC11.34□□□□□ -0.59
NDUFA1O15239 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
NDUFA1O15239 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
NDUFA1O15239 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
NDUFA1O15239 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
NDUFA1O15239 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
NDUFA1O15239 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
NDUFA1O15239 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.34□□□□□ -0.59
NDUFA1O15239 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC11.34□□□□□ -0.59
NDUFA1O15239 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
NDUFA1O15239 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
NDUFA1O15239 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
NDUFA1O15239 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC11.34□□□□□ -0.59
NDUFA1O15239 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.34□□□□□ -0.59
NDUFA1O15239 KRT18P1-202ENST00000452408 1331 ntBASIC11.34□□□□□ -0.59
NDUFA1O15239 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.34□□□□□ -0.59
NDUFA1O15239 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.33□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms