Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 AC140113.3-201ENST00000605663 199 ntBASIC11.64□□□□□ -0.55
LINC01546A6NGU7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
LINC01546A6NGU7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 SPDYE21P-201ENST00000413323 827 ntBASIC11.63□□□□□ -0.55
LINC01546A6NGU7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 AL359075.1-203ENST00000462729 1002 ntBASIC11.63□□□□□ -0.55
LINC01546A6NGU7 AC098590.1-201ENST00000468126 897 ntBASIC11.63□□□□□ -0.55
LINC01546A6NGU7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
LINC01546A6NGU7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 SIGLEC16-201ENST00000599858 1437 ntBASIC11.62□□□□□ -0.55
LINC01546A6NGU7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.62□□□□□ -0.55
LINC01546A6NGU7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms