Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 SNHG9-202ENST00000564014 471 ntBASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 AC027307.2-201ENST00000591252 911 ntBASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 ME2P1-201ENST00000426028 1970 ntBASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHGC4Q9Y5F7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGC4Q9Y5F7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGC4Q9Y5F7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGC4Q9Y5F7 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
PCDHGC4Q9Y5F7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PCDHGC4Q9Y5F7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.26
PCDHGC4Q9Y5F7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 AC254562.1-201ENST00000417586 456 ntBASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 CNN2P11-201ENST00000429351 262 ntBASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 AP000344.2-201ENST00000512987 629 ntBASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 LINC01225-203ENST00000563550 1244 ntBASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHGC4Q9Y5F7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 AC005237.2-201ENST00000434368 219 ntBASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 AC069335.1-201ENST00000489972 472 ntBASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHGC4Q9Y5F7 PRYP6-201ENST00000514804 343 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms