Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 RNA5SP421-201ENST00000516864 134 ntBASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 AC140878.1-201ENST00000565277 250 ntBASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 KRT8P39-201ENST00000396270 1433 ntBASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 AL118508.1-201ENST00000613502 2345 ntBASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHB2Q9Y5E7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 PRYP6-201ENST00000514804 343 ntBASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 AL139011.1-202ENST00000642063 584 ntBASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 AC092171.3-201ENST00000610122 2651 ntBASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 FO538757.1-201ENST00000623083 1397 ntBASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
PCDHB2Q9Y5E7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 HLA-A-202ENST00000376806 1854 ntBASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 TREML5P-201ENST00000421694 576 ntBASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 MIR4453-201ENST00000584019 89 ntBASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.02■□□□□ 0.48
PCDHB2Q9Y5E7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
PCDHB2Q9Y5E7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB2Q9Y5E7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB2Q9Y5E7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB2Q9Y5E7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB2Q9Y5E7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PCDHB2Q9Y5E7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB2Q9Y5E7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB2Q9Y5E7 AC124067.4-201ENST00000519691 2379 ntBASIC18.01■□□□□ 0.47
PCDHB2Q9Y5E7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PCDHB2Q9Y5E7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDHB2Q9Y5E7 BASP1P1-201ENST00000430708 665 ntBASIC18.01■□□□□ 0.47
PCDHB2Q9Y5E7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDHB2Q9Y5E7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PCDHB2Q9Y5E7 HLA-J-202ENST00000469281 1241 ntBASIC18.01■□□□□ 0.47
PCDHB2Q9Y5E7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms