Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 AC069120.2-201ENST00000524091 540 ntBASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 SPCS2P1-201ENST00000561636 679 ntBASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 AC092364.2-202ENST00000597012 1073 ntBASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 RNF216P1-203ENST00000404404 2427 ntBASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
LINC00588Q9Y4M8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 FAM220BP-201ENST00000377689 816 ntBASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 FAM8A3P-201ENST00000427218 844 ntBASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 BASP1P1-201ENST00000430708 665 ntBASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 BCRP1-201ENST00000444246 691 ntBASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 RNA5SP410-201ENST00000516285 106 ntBASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 RNA5SP421-201ENST00000516864 134 ntBASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 AL096865.1-201ENST00000606796 927 ntBASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 AC078925.2-201ENST00000624013 1973 ntBASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
LINC00588Q9Y4M8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
LINC00588Q9Y4M8 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.27□□□□□ -0.61
LINC00588Q9Y4M8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms