Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 KRT18P32-201ENST00000424695 1287 ntBASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 AC027307.2-201ENST00000591252 911 ntBASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 GPAA1P2-202ENST00000606848 1787 ntBASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP6V0A4Q9HBG4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 GGT4P-201ENST00000623672 1708 ntBASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 UXT-AS1-201ENST00000590504 1525 ntBASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 AC015911.4-201ENST00000588022 1070 ntBASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 Z92544.3-201ENST00000624747 417 ntBASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP6V0A4Q9HBG4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 AL138918.1-201ENST00000568306 659 ntBASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 AC005498.2-205ENST00000593218 784 ntBASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 AC020765.3-201ENST00000613051 740 ntBASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP6V0A4Q9HBG4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.33■□□□□ 0.53
ATP6V0A4Q9HBG4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.33■□□□□ 0.53
ATP6V0A4Q9HBG4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V0A4Q9HBG4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.33■□□□□ 0.53
ATP6V0A4Q9HBG4 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V0A4Q9HBG4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ATP6V0A4Q9HBG4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms