Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDH11XQ9BZA7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 COX11-210ENST00000639671 696 ntBASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDH11XQ9BZA7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PCDH11XQ9BZA7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
PCDH11XQ9BZA7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDH11XQ9BZA7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDH11XQ9BZA7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDH11XQ9BZA7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 KRT223P-202ENST00000449164 1292 ntBASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 AC092552.1-201ENST00000547243 906 ntBASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 AL391069.4-201ENST00000609583 481 ntBASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 Z97205.2-201ENST00000564697 1639 ntBASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 AC005622.1-201ENST00000636801 1703 ntBASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PCDH11XQ9BZA7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 AC104596.2-201ENST00000512793 793 ntBASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 AC010319.3-201ENST00000597028 470 ntBASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 RPSAP52-203ENST00000622976 1023 ntBASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 LINC01144-201ENST00000626198 1710 ntBASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC21.13■□□□□ 0.97
PCDH11XQ9BZA7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 BOLA2P3-201ENST00000404566 256 ntBASIC21.12■□□□□ 0.97
PCDH11XQ9BZA7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms