Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
UPK3BQ9BT76 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 CEND1P1-201ENST00000451006 455 ntBASIC11.55□□□□□ -0.56
UPK3BQ9BT76 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 AP000344.2-201ENST00000512987 629 ntBASIC11.55□□□□□ -0.56
UPK3BQ9BT76 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 FAM86C2P-203ENST00000528684 1004 ntBASIC11.55□□□□□ -0.56
UPK3BQ9BT76 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 AC109635.5-201ENST00000533593 962 ntBASIC11.55□□□□□ -0.56
UPK3BQ9BT76 CCND1-203ENST00000536559 553 ntTSL 3 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 AC087641.1-201ENST00000557561 1021 ntBASIC11.55□□□□□ -0.56
UPK3BQ9BT76 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
UPK3BQ9BT76 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 DNAJB3-202ENST00000449667 1266 ntBASIC11.54□□□□□ -0.56
UPK3BQ9BT76 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.54□□□□□ -0.56
UPK3BQ9BT76 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 AL161645.1-201ENST00000622716 1255 ntBASIC11.54□□□□□ -0.56
UPK3BQ9BT76 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
UPK3BQ9BT76 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms