Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 FICD-205ENST00000552758 603 ntTSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 IRF8-202ENST00000562492 946 ntTSL 3 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 MIR5100-201ENST00000579544 119 ntBASIC9.92□□□□□ -0.82
LIMD2Q9BT23 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
LIMD2Q9BT23 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 AC104640.1-201ENST00000562617 2109 ntBASIC9.91□□□□□ -0.82
LIMD2Q9BT23 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 NUS1P1-201ENST00000446295 882 ntBASIC9.91□□□□□ -0.82
LIMD2Q9BT23 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 RBSN-204ENST00000449050 903 ntTSL 2 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 TPM1-218ENST00000559281 851 ntTSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 MIR3180-1-201ENST00000580374 94 ntBASIC9.91□□□□□ -0.82
LIMD2Q9BT23 MIR3180-3-201ENST00000584616 94 ntBASIC9.91□□□□□ -0.82
LIMD2Q9BT23 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 AP000867.4-201ENST00000641616 219 ntBASIC9.91□□□□□ -0.82
LIMD2Q9BT23 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 AC007950.2-201ENST00000615045 2347 ntBASIC9.91□□□□□ -0.82
LIMD2Q9BT23 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LIMD2Q9BT23 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms