Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
CDK5RAP1Q96SZ6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDK5RAP1Q96SZ6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
CDK5RAP1Q96SZ6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.08■□□□□ 0.33
CDK5RAP1Q96SZ6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.08■□□□□ 0.33
CDK5RAP1Q96SZ6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.08■□□□□ 0.33
CDK5RAP1Q96SZ6 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.08■□□□□ 0.33
CDK5RAP1Q96SZ6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CDK5RAP1Q96SZ6 AC008677.1-201ENST00000519230 1561 ntBASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 AL035456.1-201ENST00000456064 1369 ntBASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 AC107890.1-201ENST00000422478 521 ntBASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 RNA5SP410-201ENST00000516285 106 ntBASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 AC140878.1-201ENST00000565277 250 ntBASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 AC007967.4-201ENST00000614700 386 ntBASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 RNF216P1-203ENST00000404404 2427 ntBASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDK5RAP1Q96SZ6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 AL365330.1-201ENST00000607459 531 ntBASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 AC093512.1-201ENST00000617969 520 ntBASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.07■□□□□ 0.32
CDK5RAP1Q96SZ6 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CDK5RAP1Q96SZ6 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms