Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC092338.2-201ENST00000568827 1415 ntBASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB3IPQ96QF0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 LINC00528-201ENST00000600723 2160 ntBASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 AC012618.2-201ENST00000428058 849 ntBASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 AP005242.2-201ENST00000580065 1175 ntBASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 AC013467.2-201ENST00000605472 835 ntBASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 REXO1L8P-201ENST00000604378 1897 ntBASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB3IPQ96QF0 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 RPS2P55-201ENST00000397318 883 ntBASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 AC107956.1-201ENST00000494359 873 ntBASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 DUX4L17-201ENST00000557360 1267 ntBASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 CD177P1-201ENST00000606252 935 ntBASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 AC138969.2-201ENST00000532739 9932 ntBASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
RAB3IPQ96QF0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RAB3IPQ96QF0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms