Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.52■□□□□ 0.24
SIPA1Q96FS4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SIPA1Q96FS4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIPA1Q96FS4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIPA1Q96FS4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SIPA1Q96FS4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SIPA1Q96FS4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.52■□□□□ 0.23
SIPA1Q96FS4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIPA1Q96FS4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIPA1Q96FS4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIPA1Q96FS4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SIPA1Q96FS4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SIPA1Q96FS4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 AC087499.5-201ENST00000452760 1342 ntBASIC16.51■□□□□ 0.23
SIPA1Q96FS4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 TEX28P1-201ENST00000613479 1221 ntBASIC16.51■□□□□ 0.23
SIPA1Q96FS4 TEX28P2-201ENST00000617764 1221 ntBASIC16.51■□□□□ 0.23
SIPA1Q96FS4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SIPA1Q96FS4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 RPL37AP1-201ENST00000412502 279 ntBASIC16.5■□□□□ 0.23
SIPA1Q96FS4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 AC020765.3-201ENST00000613051 740 ntBASIC16.5■□□□□ 0.23
SIPA1Q96FS4 AL358472.5-202ENST00000641448 1267 ntBASIC16.5■□□□□ 0.23
SIPA1Q96FS4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 TNRC18P3-201ENST00000441896 2691 ntBASIC16.5■□□□□ 0.23
SIPA1Q96FS4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SIPA1Q96FS4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.49■□□□□ 0.23
SIPA1Q96FS4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SIPA1Q96FS4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms