Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ECHDC3Q96DC8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 AC005052.1-201ENST00000625181 2492 ntBASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ECHDC3Q96DC8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 SPDYE7P-202ENST00000420373 878 ntBASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 AL645939.2-201ENST00000427340 991 ntBASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 Z92544.3-201ENST00000624747 417 ntBASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
ECHDC3Q96DC8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 AC008677.1-201ENST00000519230 1561 ntBASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 RFPL4AP1-201ENST00000530883 850 ntBASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 AC061975.2-201ENST00000581722 295 ntBASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
ECHDC3Q96DC8 AC018529.1-201ENST00000613063 361 ntBASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms