Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 AC092919.2-201ENST00000623631 1645 ntBASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 MST1L-201ENST00000442552 2185 ntBASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 AP002490.2-201ENST00000524791 560 ntBASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SH3KBP1Q96B97 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 HMGA1P7-201ENST00000406908 502 ntBASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 AL671277.1-201ENST00000429656 993 ntBASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 AC087641.1-201ENST00000557561 1021 ntBASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 AC105339.1-204ENST00000636249 355 ntBASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 PCDHB17P-201ENST00000539533 2393 ntBASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SH3KBP1Q96B97 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.37■□□□□ 0.21
SH3KBP1Q96B97 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms