Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CT55Q8WUE5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CT55Q8WUE5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.29■□□□□ 0.04
CT55Q8WUE5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CT55Q8WUE5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 AC006538.1-201ENST00000567905 1585 ntBASIC15.28■□□□□ 0.04
CT55Q8WUE5 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 LETM1P2-201ENST00000597330 2178 ntBASIC15.28■□□□□ 0.04
CT55Q8WUE5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 CU639417.3-201ENST00000624240 1404 ntBASIC15.28■□□□□ 0.04
CT55Q8WUE5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CT55Q8WUE5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CT55Q8WUE5 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CT55Q8WUE5 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CT55Q8WUE5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CT55Q8WUE5 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CT55Q8WUE5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CT55Q8WUE5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
CT55Q8WUE5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
CT55Q8WUE5 KRT8P12-202ENST00000472924 1397 ntBASIC15.27■□□□□ 0.04
CT55Q8WUE5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CT55Q8WUE5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CT55Q8WUE5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CT55Q8WUE5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CT55Q8WUE5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.27■□□□□ 0.04
CT55Q8WUE5 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CT55Q8WUE5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CT55Q8WUE5 SPDYE19P-201ENST00000338590 713 ntBASIC15.27■□□□□ 0.04
CT55Q8WUE5 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CT55Q8WUE5 DFFBP1-201ENST00000433250 979 ntBASIC15.27■□□□□ 0.04
CT55Q8WUE5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.27■□□□□ 0.04
CT55Q8WUE5 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.27■□□□□ 0.04
CT55Q8WUE5 HLA-J-202ENST00000469281 1241 ntBASIC15.27■□□□□ 0.04
CT55Q8WUE5 SPDYE18-201ENST00000510091 1050 ntBASIC15.27■□□□□ 0.04
CT55Q8WUE5 DOC2GP-202ENST00000514950 1163 ntBASIC15.27■□□□□ 0.04
CT55Q8WUE5 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.27■□□□□ 0.04
CT55Q8WUE5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.27■□□□□ 0.04
CT55Q8WUE5 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.27■□□□□ 0.04
CT55Q8WUE5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.27■□□□□ 0.04
CT55Q8WUE5 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CT55Q8WUE5 AC004790.1-201ENST00000612686 536 ntBASIC15.27■□□□□ 0.04
CT55Q8WUE5 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.27■□□□□ 0.04
CT55Q8WUE5 AL033527.5-202ENST00000641632 1098 ntBASIC15.27■□□□□ 0.04
CT55Q8WUE5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
CT55Q8WUE5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CT55Q8WUE5 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CT55Q8WUE5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CT55Q8WUE5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CT55Q8WUE5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CT55Q8WUE5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CT55Q8WUE5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CT55Q8WUE5 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.27■□□□□ 0.03
CT55Q8WUE5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CT55Q8WUE5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.27■□□□□ 0.03
CT55Q8WUE5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CT55Q8WUE5 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.27■□□□□ 0.03
CT55Q8WUE5 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.27■□□□□ 0.03
CT55Q8WUE5 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CT55Q8WUE5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CT55Q8WUE5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CT55Q8WUE5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.26■□□□□ 0.03
CT55Q8WUE5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms