Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCDC148Q8NFR7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 AC046158.3-201ENST00000624947 2558 ntBASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 ELL2P1-201ENST00000413990 1906 ntBASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 RPSAP43-201ENST00000402237 625 ntBASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 UPF3AP3-201ENST00000420996 769 ntBASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 AL671277.1-201ENST00000429656 993 ntBASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 ME2P1-201ENST00000426028 1970 ntBASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC148Q8NFR7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC148Q8NFR7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.02■□□□□ 0.63
CCDC148Q8NFR7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC148Q8NFR7 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.02■□□□□ 0.63
CCDC148Q8NFR7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.02■□□□□ 0.63
CCDC148Q8NFR7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC148Q8NFR7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 POU5F1P6-201ENST00000466990 990 ntBASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 YBX1P5-201ENST00000509441 847 ntBASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 AL135744.1-201ENST00000565098 629 ntBASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC148Q8NFR7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC148Q8NFR7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19■□□□□ 0.63
CCDC148Q8NFR7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms