Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 U82695.1-201ENST00000635752 1889 ntBASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
KLHDC9Q8NEP7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 PP12613-201ENST00000424958 2230 ntBASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 AL365330.1-201ENST00000607459 531 ntBASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 AC006538.1-201ENST00000567905 1585 ntBASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
KLHDC9Q8NEP7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 AC005622.1-201ENST00000636801 1703 ntBASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.97■□□□□ 0.47
KLHDC9Q8NEP7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 AC018665.1-201ENST00000622927 1362 ntBASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
KLHDC9Q8NEP7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms