Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN22Q8N7P3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 PTCHD3P3-201ENST00000403073 906 ntBASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 ELK2BP-201ENST00000415014 1224 ntBASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN22Q8N7P3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CLDN22Q8N7P3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.08■□□□□ 0.01
CLDN22Q8N7P3 AL353732.1-201ENST00000569618 1459 ntBASIC15.08■□□□□ 0.01
CLDN22Q8N7P3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN22Q8N7P3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN22Q8N7P3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN22Q8N7P3 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 AL136379.1-201ENST00000623471 2642 ntBASIC15.08■□□□□ 0
CLDN22Q8N7P3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN22Q8N7P3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN22Q8N7P3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN22Q8N7P3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN22Q8N7P3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN22Q8N7P3 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN22Q8N7P3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN22Q8N7P3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN22Q8N7P3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 SCARNA2-201ENST00000458748 420 ntBASIC15.08■□□□□ 0
CLDN22Q8N7P3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN22Q8N7P3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 CYP2A7P1-201ENST00000595391 815 ntBASIC15.08■□□□□ 0
CLDN22Q8N7P3 LINC01711-201ENST00000598340 967 ntBASIC15.08■□□□□ 0
CLDN22Q8N7P3 AC010654.1-201ENST00000615722 808 ntBASIC15.08■□□□□ 0
CLDN22Q8N7P3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN22Q8N7P3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN22Q8N7P3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CLDN22Q8N7P3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms