Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 ANKRD19P-201ENST00000338192 862 ntBASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 AL606495.2-201ENST00000605867 535 ntBASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 AL365330.1-201ENST00000607459 531 ntBASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CNKSR3Q6P9H4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 BNIP3P42-201ENST00000454982 569 ntBASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 USP32P1-208ENST00000506594 1164 ntBASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 MIR4321-201ENST00000592276 80 ntBASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 BNIP3P29-201ENST00000598302 571 ntBASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 AC011447.5-201ENST00000616168 564 ntBASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNKSR3Q6P9H4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 AC233724.13-201ENST00000598383 410 ntBASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 AL136982.4-201ENST00000437689 1740 ntBASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNKSR3Q6P9H4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms