Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SGO1Q5FBB7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 AL691432.3-201ENST00000621860 400 ntBASIC16.11■□□□□ 0.17
SGO1Q5FBB7 AC005593.1-201ENST00000624894 515 ntBASIC16.11■□□□□ 0.17
SGO1Q5FBB7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 PAUPAR-201ENST00000630360 2965 ntBASIC16.11■□□□□ 0.17
SGO1Q5FBB7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SGO1Q5FBB7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 AL353732.1-201ENST00000569618 1459 ntBASIC16.1■□□□□ 0.17
SGO1Q5FBB7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.1■□□□□ 0.17
SGO1Q5FBB7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 KRT18P67-201ENST00000432816 1264 ntBASIC16.1■□□□□ 0.17
SGO1Q5FBB7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 RN7SL510P-201ENST00000581311 263 ntBASIC16.1■□□□□ 0.17
SGO1Q5FBB7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 AL513523.2-202ENST00000427283 2040 ntBASIC16.1■□□□□ 0.17
SGO1Q5FBB7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
SGO1Q5FBB7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGO1Q5FBB7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGO1Q5FBB7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.09■□□□□ 0.17
SGO1Q5FBB7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGO1Q5FBB7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SGO1Q5FBB7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms