Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HLA-BQ31612 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HLA-BQ31612 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HLA-BQ31612 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HLA-BQ31612 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-BQ31612 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-BQ31612 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-BQ31612 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 AP002490.2-201ENST00000524791 560 ntBASIC15.9■□□□□ 0.14
HLA-BQ31612 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-BQ31612 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-BQ31612 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.9■□□□□ 0.14
HLA-BQ31612 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-BQ31612 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HLA-BQ31612 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-BQ31612 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.9■□□□□ 0.14
HLA-BQ31612 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HLA-BQ31612 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.9■□□□□ 0.14
HLA-BQ31612 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HLA-BQ31612 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HLA-BQ31612 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLA-BQ31612 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HLA-BQ31612 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HLA-BQ31612 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-BQ31612 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-BQ31612 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-BQ31612 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HLA-BQ31612 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-BQ31612 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.89■□□□□ 0.13
HLA-BQ31612 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.89■□□□□ 0.13
HLA-BQ31612 TMEM14DP-201ENST00000422205 345 ntBASIC15.89■□□□□ 0.13
HLA-BQ31612 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.89■□□□□ 0.13
HLA-BQ31612 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-BQ31612 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.89■□□□□ 0.13
HLA-BQ31612 AC007389.4-201ENST00000454674 793 ntBASIC15.89■□□□□ 0.13
HLA-BQ31612 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.89■□□□□ 0.13
HLA-BQ31612 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.89■□□□□ 0.13
HLA-BQ31612 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
HLA-BQ31612 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.89■□□□□ 0.13
HLA-BQ31612 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
HLA-BQ31612 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HLA-BQ31612 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.89■□□□□ 0.13
HLA-BQ31612 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HLA-BQ31612 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
HLA-BQ31612 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HLA-BQ31612 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLA-BQ31612 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HLA-BQ31612 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-BQ31612 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-BQ31612 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-BQ31612 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HLA-BQ31612 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-BQ31612 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-BQ31612 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HLA-BQ31612 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-BQ31612 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-BQ31612 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-BQ31612 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-BQ31612 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
HLA-BQ31612 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HLA-BQ31612 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-BQ31612 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HLA-BQ31612 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-BQ31612 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-BQ31612 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-BQ31612 AC234783.1-201ENST00000441761 496 ntBASIC15.88■□□□□ 0.13
HLA-BQ31612 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-BQ31612 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-BQ31612 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms