Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.87■□□□□ 0.13
EPHA4P54764 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
EPHA4P54764 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
EPHA4P54764 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
EPHA4P54764 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHA4P54764 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHA4P54764 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
EPHA4P54764 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHA4P54764 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.86■□□□□ 0.13
EPHA4P54764 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
EPHA4P54764 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHA4P54764 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
EPHA4P54764 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHA4P54764 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
EPHA4P54764 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.86■□□□□ 0.13
EPHA4P54764 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.86■□□□□ 0.13
EPHA4P54764 AC092580.3-201ENST00000430932 139 ntBASIC15.86■□□□□ 0.13
EPHA4P54764 AC241585.1-201ENST00000433527 519 ntBASIC15.86■□□□□ 0.13
EPHA4P54764 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHA4P54764 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 AL512638.1-201ENST00000457493 794 ntBASIC15.86■□□□□ 0.13
EPHA4P54764 HLA-V-204ENST00000476601 1289 ntBASIC15.86■□□□□ 0.13
EPHA4P54764 RNA5SP410-201ENST00000516285 106 ntBASIC15.86■□□□□ 0.13
EPHA4P54764 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.86■□□□□ 0.13
EPHA4P54764 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.86■□□□□ 0.13
EPHA4P54764 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 AC024267.1-201ENST00000582320 895 ntBASIC15.86■□□□□ 0.13
EPHA4P54764 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.86■□□□□ 0.13
EPHA4P54764 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHA4P54764 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 CROCCP1-201ENST00000426910 5675 ntBASIC15.86■□□□□ 0.13
EPHA4P54764 AL031731.1-201ENST00000642131 2094 ntBASIC15.86■□□□□ 0.13
EPHA4P54764 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.86■□□□□ 0.13
EPHA4P54764 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
EPHA4P54764 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.86■□□□□ 0.13
EPHA4P54764 AL391005.1-201ENST00000623953 2435 ntBASIC15.86■□□□□ 0.13
EPHA4P54764 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
EPHA4P54764 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.86■□□□□ 0.13
EPHA4P54764 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA4P54764 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHA4P54764 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA4P54764 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
EPHA4P54764 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHA4P54764 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA4P54764 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA4P54764 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA4P54764 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHA4P54764 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.85■□□□□ 0.13
EPHA4P54764 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA4P54764 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHA4P54764 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.85■□□□□ 0.13
EPHA4P54764 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.85■□□□□ 0.13
EPHA4P54764 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.85■□□□□ 0.13
EPHA4P54764 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
EPHA4P54764 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.85■□□□□ 0.13
EPHA4P54764 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
EPHA4P54764 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
EPHA4P54764 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
EPHA4P54764 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms