Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.03■□□□□ 0.16
PDX1P52945 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PDX1P52945 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.03■□□□□ 0.16
PDX1P52945 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PDX1P52945 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.03■□□□□ 0.16
PDX1P52945 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.03■□□□□ 0.16
PDX1P52945 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.03■□□□□ 0.16
PDX1P52945 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDX1P52945 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDX1P52945 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
PDX1P52945 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
PDX1P52945 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDX1P52945 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.03■□□□□ 0.16
PDX1P52945 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.03■□□□□ 0.16
PDX1P52945 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDX1P52945 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDX1P52945 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.02■□□□□ 0.16
PDX1P52945 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PDX1P52945 LINC00895-201ENST00000629028 1637 ntBASIC16.02■□□□□ 0.16
PDX1P52945 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDX1P52945 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.02■□□□□ 0.16
PDX1P52945 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDX1P52945 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDX1P52945 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PDX1P52945 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDX1P52945 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
PDX1P52945 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PDX1P52945 MRPS18AP1-201ENST00000414458 589 ntBASIC16.02■□□□□ 0.16
PDX1P52945 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.02■□□□□ 0.16
PDX1P52945 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
PDX1P52945 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.02■□□□□ 0.16
PDX1P52945 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.02■□□□□ 0.16
PDX1P52945 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDX1P52945 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PDX1P52945 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDX1P52945 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDX1P52945 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDX1P52945 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PDX1P52945 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PDX1P52945 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PDX1P52945 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.15
PDX1P52945 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.02■□□□□ 0.15
PDX1P52945 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
PDX1P52945 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.01■□□□□ 0.15
PDX1P52945 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PDX1P52945 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.01■□□□□ 0.15
PDX1P52945 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
PDX1P52945 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.01■□□□□ 0.15
PDX1P52945 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.01■□□□□ 0.15
PDX1P52945 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.01■□□□□ 0.15
PDX1P52945 SERBP1P5-201ENST00000510079 1181 ntBASIC16.01■□□□□ 0.15
PDX1P52945 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 AC084018.2-201ENST00000613093 2607 ntBASIC16.01■□□□□ 0.15
PDX1P52945 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PDX1P52945 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.01■□□□□ 0.15
PDX1P52945 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.01■□□□□ 0.15
PDX1P52945 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.01■□□□□ 0.15
PDX1P52945 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PDX1P52945 AC092068.3-201ENST00000587894 2016 ntBASIC16.01■□□□□ 0.15
PDX1P52945 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PDX1P52945 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16■□□□□ 0.15
PDX1P52945 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16■□□□□ 0.15
PDX1P52945 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 AC063926.2-201ENST00000623766 1308 ntBASIC16■□□□□ 0.15
PDX1P52945 FRMD8P1-201ENST00000440433 1524 ntBASIC16■□□□□ 0.15
PDX1P52945 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16■□□□□ 0.15
PDX1P52945 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16■□□□□ 0.15
PDX1P52945 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms