Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TUBP50607 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TUBP50607 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TUBP50607 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBP50607 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
TUBP50607 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
TUBP50607 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.42■□□□□ 0.38
TUBP50607 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TUBP50607 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.42■□□□□ 0.38
TUBP50607 AC093520.2-201ENST00000561830 333 ntBASIC17.42■□□□□ 0.38
TUBP50607 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.42■□□□□ 0.38
TUBP50607 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TUBP50607 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.42■□□□□ 0.38
TUBP50607 AC084121.4-201ENST00000641598 221 ntBASIC17.42■□□□□ 0.38
TUBP50607 AF228730.8-201ENST00000642140 221 ntBASIC17.42■□□□□ 0.38
TUBP50607 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TUBP50607 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBP50607 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.42■□□□□ 0.38
TUBP50607 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TUBP50607 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TUBP50607 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TUBP50607 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.41■□□□□ 0.38
TUBP50607 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.41■□□□□ 0.38
TUBP50607 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
TUBP50607 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBP50607 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBP50607 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBP50607 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TUBP50607 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 AL139400.1-201ENST00000366220 510 ntBASIC17.41■□□□□ 0.38
TUBP50607 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBP50607 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TUBP50607 SPCS2P4-201ENST00000436160 681 ntBASIC17.41■□□□□ 0.38
TUBP50607 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.41■□□□□ 0.38
TUBP50607 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.41■□□□□ 0.38
TUBP50607 LINC01225-203ENST00000563550 1244 ntBASIC17.41■□□□□ 0.38
TUBP50607 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBP50607 AC027796.2-201ENST00000575326 344 ntBASIC17.41■□□□□ 0.38
TUBP50607 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.41■□□□□ 0.38
TUBP50607 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.41■□□□□ 0.38
TUBP50607 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.41■□□□□ 0.38
TUBP50607 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.41■□□□□ 0.38
TUBP50607 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TUBP50607 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TUBP50607 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBP50607 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TUBP50607 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.41■□□□□ 0.38
TUBP50607 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TUBP50607 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.4■□□□□ 0.38
TUBP50607 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TUBP50607 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TUBP50607 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.4■□□□□ 0.38
TUBP50607 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TUBP50607 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.4■□□□□ 0.38
TUBP50607 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TUBP50607 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TUBP50607 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.4■□□□□ 0.38
TUBP50607 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.4■□□□□ 0.38
TUBP50607 AL645939.2-201ENST00000427340 991 ntBASIC17.4■□□□□ 0.38
TUBP50607 AC005237.2-201ENST00000434368 219 ntBASIC17.4■□□□□ 0.38
TUBP50607 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.4■□□□□ 0.38
TUBP50607 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms