Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.451e-7■■□□□ 13.4
RPS3P23396 RAD23A-204ENST00000588329 1034 ntTSL 517.73■□□□□ 0.431e-7■■□□□ 13.4
RPS3P23396 RAD23A-210ENST00000593114 1691 ntTSL 516.43■□□□□ 0.221e-7■■□□□ 13.4
RPS3P23396 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.25□□□□□ -0.131e-7■■□□□ 13.4
RPS3P23396 FUS-205ENST00000487045 952 ntTSL 211.48□□□□□ -0.571e-16■■□□□ 13.4
RPS3P23396 ERLIN1-201ENST00000370408 962 ntTSL 520.92■□□□□ 0.942e-6■■□□□ 13.4
RPS3P23396 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.522e-6■■□□□ 13.4
RPS3P23396 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.162e-6■■□□□ 13.4
RPS3P23396 FGFR4-213ENST00000511076 838 ntTSL 519.12■□□□□ 0.656e-9■■□□□ 13.4
RPS3P23396 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.062e-20■■□□□ 13.4
RPS3P23396 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.98□□□□□ -0.012e-20■■□□□ 13.4
RPS3P23396 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.32e-20■■□□□ 13.4
RPS3P23396 STMN1-207ENST00000465604 2947 ntTSL 1 (best)3.23□□□□□ -1.892e-20■■□□□ 13.4
RPS3P23396 PRKCSH-208ENST00000589126 625 ntTSL 513.09□□□□□ -0.319e-8■■□□□ 13.4
RPS3P23396 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.064e-7■■□□□ 13.4
RPS3P23396 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.014e-7■■□□□ 13.4
RPS3P23396 SHMT2-206ENST00000553529 562 ntTSL 417.56■□□□□ 0.46e-7■■□□□ 13.4
RPS3P23396 SHMT2-234ENST00000557703 542 ntTSL 413.48□□□□□ -0.256e-7■■□□□ 13.4
RPS3P23396 SHMT2-221ENST00000555773 600 ntTSL 212.33□□□□□ -0.446e-7■■□□□ 13.4
RPS3P23396 SHMT2-224ENST00000556737 572 ntTSL 210□□□□□ -0.816e-7■■□□□ 13.4
RPS3P23396 RABAC1-209ENST00000601476 771 ntTSL 218.39■□□□□ 0.533e-15■■□□□ 13.4
RPS3P23396 RABAC1-205ENST00000599219 799 ntTSL 217.26■□□□□ 0.353e-15■■□□□ 13.4
RPS3P23396 PLOD2-208ENST00000480704 550 ntTSL 414.83□□□□□ -0.041e-29■■□□□ 13.4
RPS3P23396 SERPINF2-204ENST00000453066 842 ntTSL 516.87■□□□□ 0.291e-16■■□□□ 13.4
RPS3P23396 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.131e-8■■□□□ 13.4
RPS3P23396 ASGR2-205ENST00000574868 1202 ntTSL 515.74■□□□□ 0.116e-12■■□□□ 13.3
RPS3P23396 ASGR2-206ENST00000576487 1055 ntTSL 1 (best)15.68■□□□□ 0.16e-12■■□□□ 13.3
RPS3P23396 ASGR2-204ENST00000450034 932 ntTSL 213.95□□□□□ -0.186e-12■■□□□ 13.3
RPS3P23396 DPYSL2-205ENST00000521983 591 ntTSL 413.6□□□□□ -0.231e-6■■□□□ 13.3
RPS3P23396 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.466e-17■■□□□ 13.3
RPS3P23396 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.616e-17■■□□□ 13.3
RPS3P23396 RPL38-201ENST00000311111 1170 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.96e-17■■□□□ 13.3
RPS3P23396 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.16□□□□□ -1.746e-17■■□□□ 13.3
RPS3P23396 SPNS1-205ENST00000561868 441 ntTSL 515.25■□□□□ 0.033e-6■■□□□ 13.3
RPS3P23396 TM9SF1-209ENST00000530468 1065 ntTSL 214.89□□□□□ -0.033e-7■■□□□ 13.3
RPS3P23396 TM7SF2-220ENST00000531029 530 ntTSL 517.49■□□□□ 0.396e-12■■□□□ 13.3
RPS3P23396 TM7SF2-206ENST00000526048 1168 ntTSL 516.02■□□□□ 0.166e-8■■□□□ 13.3
RPS3P23396 PLIN2-204ENST00000434144 623 ntTSL 36.02□□□□□ -1.458e-11■■□□□ 13.3
RPS3P23396 RACK1-202ENST00000502548 1090 ntTSL 1 (best)12.63□□□□□ -0.392e-11■■□□□ 13.3
RPS3P23396 RACK1-208ENST00000503494 843 ntTSL 38.43□□□□□ -1.062e-11■■□□□ 13.3
RPS3P23396 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.861e-6■■□□□ 13.3
RPS3P23396 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.611e-6■■□□□ 13.3
RPS3P23396 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.521e-6■■□□□ 13.3
RPS3P23396 EGFL7-207ENST00000492862 723 ntTSL 517.22■□□□□ 0.351e-6■■□□□ 13.3
RPS3P23396 EGFL7-205ENST00000490469 456 ntTSL 516.68■□□□□ 0.261e-6■■□□□ 13.3
RPS3P23396 GGCX-208ENST00000481541 600 ntTSL 210.56□□□□□ -0.727e-8■■□□□ 13.3
RPS3P23396 ASGR1-206ENST00000573596 2083 ntTSL 517.94■□□□□ 0.466e-13■■□□□ 13.3
RPS3P23396 ASGR1-205ENST00000573083 855 ntTSL 39.75□□□□□ -0.856e-13■■□□□ 13.3
RPS3P23396 YARS-206ENST00000478828 1044 ntTSL 210.68□□□□□ -0.71e-11■■□□□ 13.3
RPS3P23396 PTPA-226ENST00000455292 949 ntTSL 518.91■□□□□ 0.623e-6■■□□□ 13.3
RPS3P23396 PTPA-209ENST00000414331 681 ntTSL 315.14■□□□□ 0.013e-6■■□□□ 13.3
RPS3P23396 PTPA-222ENST00000445241 949 ntTSL 314.36□□□□□ -0.113e-6■■□□□ 13.3
RPS3P23396 TPX2-201ENST00000300403 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.493e-6■■□□□ 13.3
RPS3P23396 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC11.94□□□□□ -0.53e-6■■□□□ 13.3
RPS3P23396 HK1-201ENST00000298649 3596 ntTSL 5 BASIC10.49□□□□□ -0.732e-6■■□□□ 13.3
RPS3P23396 PARK7-210ENST00000497113 670 ntTSL 314.4□□□□□ -0.12e-6■■□□□ 13.3
RPS3P23396 PRKCSH-201ENST00000585325 598 ntTSL 412.86□□□□□ -0.352e-10■■□□□ 13.3
RPS3P23396 RNH1-213ENST00000528713 1202 ntTSL 1 (best)18.13■□□□□ 0.492e-6■■□□□ 13.3
RPS3P23396 RNH1-218ENST00000531149 709 ntTSL 315.56■□□□□ 0.082e-6■■□□□ 13.3
RPS3P23396 RNH1-219ENST00000531223 572 ntTSL 314.69□□□□□ -0.062e-6■■□□□ 13.3
RPS3P23396 RNH1-208ENST00000524780 1059 ntTSL 213.21□□□□□ -0.292e-6■■□□□ 13.3
RPS3P23396 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.123e-14■■□□□ 13.3
RPS3P23396 DDX5-218ENST00000581693 2156 ntTSL 511.51□□□□□ -0.573e-14■■□□□ 13.3
RPS3P23396 DDX5-203ENST00000540698 2225 ntTSL 511.32□□□□□ -0.63e-14■■□□□ 13.3
RPS3P23396 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC10.51□□□□□ -0.733e-14■■□□□ 13.3
RPS3P23396 DDX5-215ENST00000581230 3558 ntTSL 27.95□□□□□ -1.143e-14■■□□□ 13.3
RPS3P23396 RPL8-211ENST00000531975 698 ntTSL 311.75□□□□□ -0.531e-8■■□□□ 13.3
RPS3P23396 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.69■■□□□ 1.064e-7■■□□□ 13.3
RPS3P23396 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.744e-7■■□□□ 13.3
RPS3P23396 LRIG1-209ENST00000498287 689 ntTSL 416.84■□□□□ 0.294e-7■■□□□ 13.3
RPS3P23396 ABCC1-206ENST00000574761 996 ntTSL 212.29□□□□□ -0.442e-6■■□□□ 13.3
RPS3P23396 ABCC1-203ENST00000572053 744 ntTSL 311.14□□□□□ -0.632e-6■■□□□ 13.3
RPS3P23396 TMEM45B-205ENST00000529381 515 ntTSL 25.71□□□□□ -1.52e-6■■□□□ 13.3
RPS3P23396 RPN2-204ENST00000437329 520 ntTSL 311.2□□□□□ -0.624e-16■■□□□ 13.3
RPS3P23396 RPN2-206ENST00000456400 453 ntTSL 34.49□□□□□ -1.694e-16■■□□□ 13.3
RPS3P23396 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.289e-8■■□□□ 13.3
RPS3P23396 NDFIP1-204ENST00000509436 584 ntTSL 515.91■□□□□ 0.149e-8■■□□□ 13.3
RPS3P23396 SLC47A1-207ENST00000573009 1317 ntTSL 218.04■□□□□ 0.483e-6■■□□□ 13.3
RPS3P23396 SLC47A1-211ENST00000575377 1362 ntTSL 213.06□□□□□ -0.323e-6■■□□□ 13.3
RPS3P23396 SLC47A1-204ENST00000495425 1066 ntTSL 212.58□□□□□ -0.43e-6■■□□□ 13.3
RPS3P23396 PRMT1-213ENST00000529650 479 ntTSL 221.02■□□□□ 0.961e-9■■□□□ 13.3
RPS3P23396 PRKDC-203ENST00000432581 583 ntTSL 214.18□□□□□ -0.141e-6■■□□□ 13.3
RPS3P23396 DNM2-219ENST00000591818 538 ntTSL 413.92□□□□□ -0.184e-11■■□□□ 13.3
RPS3P23396 ENTPD6-205ENST00000417467 809 ntTSL 523.64■■□□□ 1.371e-6■■□□□ 13.3
RPS3P23396 ENTPD6-208ENST00000427553 451 ntTSL 315.44■□□□□ 0.061e-6■■□□□ 13.3
RPS3P23396 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.282e-10■■□□□ 13.3
RPS3P23396 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.31■□□□□ 0.22e-10■■□□□ 13.3
RPS3P23396 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.75□□□□□ -0.052e-10■■□□□ 13.3
RPS3P23396 MPP1-208ENST00000439370 2066 ntTSL 512.29□□□□□ -0.442e-10■■□□□ 13.3
RPS3P23396 DCXR-221ENST00000585164 475 ntTSL 521.37■■□□□ 1.011e-10■■□□□ 13.3
RPS3P23396 ETFA-217ENST00000560816 412 ntTSL 37.56□□□□□ -1.22e-7■■□□□ 13.3
RPS3P23396 MARS-227ENST00000552007 434 ntTSL 320.97■□□□□ 0.956e-9■■□□□ 13.3
RPS3P23396 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.97■□□□□ 0.796e-9■■□□□ 13.3
RPS3P23396 MARS-208ENST00000547501 510 ntTSL 218.57■□□□□ 0.566e-9■■□□□ 13.3
RPS3P23396 MARS-221ENST00000550449 739 ntTSL 317.79■□□□□ 0.446e-9■■□□□ 13.3
RPS3P23396 TMEM165-209ENST00000514070 433 ntTSL 216.52■□□□□ 0.245e-7■■□□□ 13.3
RPS3P23396 ID1-201ENST00000376105 1233 ntBASIC19.64■□□□□ 0.732e-10■■□□□ 13.3
RPS3P23396 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.572e-10■■□□□ 13.3
RPS3P23396 CENPW-201ENST00000368325 528 ntTSL 3 BASIC8.64□□□□□ -1.035e-6■■□□□ 13.3
RPS3P23396 CENPW-202ENST00000368326 443 ntTSL 2 BASIC8.15□□□□□ -1.15e-6■■□□□ 13.3
Retrieved 100 of 24,271 protein–RNA pairs in 242.8 ms