Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.24■□□□□ 0.03
BMP4P12644 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
BMP4P12644 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
BMP4P12644 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.23■□□□□ 0.03
BMP4P12644 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.23■□□□□ 0.03
BMP4P12644 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.23■□□□□ 0.03
BMP4P12644 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
BMP4P12644 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
BMP4P12644 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
BMP4P12644 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.23■□□□□ 0.03
BMP4P12644 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.23■□□□□ 0.03
BMP4P12644 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 AC005104.2-201ENST00000427818 678 ntBASIC15.23■□□□□ 0.03
BMP4P12644 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.23■□□□□ 0.03
BMP4P12644 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.23■□□□□ 0.03
BMP4P12644 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.23■□□□□ 0.03
BMP4P12644 BX640515.1-201ENST00000617215 977 ntBASIC15.23■□□□□ 0.03
BMP4P12644 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.23■□□□□ 0.03
BMP4P12644 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
BMP4P12644 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
BMP4P12644 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
BMP4P12644 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
BMP4P12644 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.23■□□□□ 0.03
BMP4P12644 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.23■□□□□ 0.03
BMP4P12644 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.23■□□□□ 0.03
BMP4P12644 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
BMP4P12644 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.22■□□□□ 0.03
BMP4P12644 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
BMP4P12644 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
BMP4P12644 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
BMP4P12644 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.22■□□□□ 0.03
BMP4P12644 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.22■□□□□ 0.03
BMP4P12644 AL590627.1-203ENST00000421194 1026 ntBASIC15.22■□□□□ 0.03
BMP4P12644 ABCD1P5-201ENST00000445663 754 ntBASIC15.22■□□□□ 0.03
BMP4P12644 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.22■□□□□ 0.03
BMP4P12644 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.22■□□□□ 0.03
BMP4P12644 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.22■□□□□ 0.03
BMP4P12644 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.22■□□□□ 0.03
BMP4P12644 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.22■□□□□ 0.03
BMP4P12644 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.22■□□□□ 0.03
BMP4P12644 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.22■□□□□ 0.03
BMP4P12644 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.22■□□□□ 0.03
BMP4P12644 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.22■□□□□ 0.03
BMP4P12644 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.22■□□□□ 0.03
BMP4P12644 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
BMP4P12644 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.22■□□□□ 0.03
BMP4P12644 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.22■□□□□ 0.03
BMP4P12644 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
BMP4P12644 AL603832.2-201ENST00000566195 2125 ntBASIC15.22■□□□□ 0.03
BMP4P12644 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.22■□□□□ 0.03
BMP4P12644 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms