Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 AL122018.1-201ENST00000446607 2310 ntBASIC16.05■□□□□ 0.16
LINGO3P0C6S8 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 NUS1P1-201ENST00000446295 882 ntBASIC16.05■□□□□ 0.16
LINGO3P0C6S8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 AC096582.2-201ENST00000510860 516 ntBASIC16.05■□□□□ 0.16
LINGO3P0C6S8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 AC109462.3-201ENST00000573934 613 ntBASIC16.05■□□□□ 0.16
LINGO3P0C6S8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 AL139327.4-201ENST00000612362 153 ntBASIC16.05■□□□□ 0.16
LINGO3P0C6S8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINGO3P0C6S8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 RCN1P2-201ENST00000398357 915 ntBASIC16.04■□□□□ 0.16
LINGO3P0C6S8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 AC111152.3-201ENST00000569699 673 ntBASIC16.04■□□□□ 0.16
LINGO3P0C6S8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 AC114341.1-201ENST00000618070 349 ntBASIC16.04■□□□□ 0.16
LINGO3P0C6S8 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 INTS4P1-201ENST00000438455 1935 ntBASIC16.04■□□□□ 0.16
LINGO3P0C6S8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LINGO3P0C6S8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.03■□□□□ 0.16
LINGO3P0C6S8 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms