Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.37□□□□□ -0.11
CSF1P09603 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.37□□□□□ -0.11
CSF1P09603 AC009078.2-202ENST00000463353 338 ntBASIC14.37□□□□□ -0.11
CSF1P09603 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CSF1P09603 KRT18P31-201ENST00000506277 1292 ntBASIC14.37□□□□□ -0.11
CSF1P09603 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.37□□□□□ -0.11
CSF1P09603 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.37□□□□□ -0.11
CSF1P09603 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.37□□□□□ -0.11
CSF1P09603 AC090616.6-201ENST00000582640 721 ntBASIC14.37□□□□□ -0.11
CSF1P09603 GPALPP1-207ENST00000611650 899 ntBASIC14.37□□□□□ -0.11
CSF1P09603 IGHV3-41-201ENST00000613121 348 ntBASIC14.37□□□□□ -0.11
CSF1P09603 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CSF1P09603 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.37□□□□□ -0.11
CSF1P09603 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CSF1P09603 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.37□□□□□ -0.11
CSF1P09603 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CSF1P09603 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.37□□□□□ -0.11
CSF1P09603 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.36□□□□□ -0.11
CSF1P09603 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.36□□□□□ -0.11
CSF1P09603 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.36□□□□□ -0.11
CSF1P09603 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CSF1P09603 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CSF1P09603 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 AC010491.1-201ENST00000563101 2797 ntBASIC14.36□□□□□ -0.11
CSF1P09603 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 AC009336.1-201ENST00000608941 1553 ntBASIC14.36□□□□□ -0.11
CSF1P09603 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.36□□□□□ -0.11
CSF1P09603 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.36□□□□□ -0.11
CSF1P09603 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CSF1P09603 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.36□□□□□ -0.11
CSF1P09603 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CSF1P09603 AC079776.4-201ENST00000511039 504 ntBASIC14.36□□□□□ -0.11
CSF1P09603 STK19B-204ENST00000512515 211 ntBASIC14.36□□□□□ -0.11
CSF1P09603 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.36□□□□□ -0.11
CSF1P09603 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.36□□□□□ -0.11
CSF1P09603 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.36□□□□□ -0.11
CSF1P09603 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CSF1P09603 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.36□□□□□ -0.11
CSF1P09603 AC138894.3-201ENST00000603787 634 ntBASIC14.36□□□□□ -0.11
CSF1P09603 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.36□□□□□ -0.11
CSF1P09603 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.36□□□□□ -0.11
CSF1P09603 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.36□□□□□ -0.11
CSF1P09603 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.36□□□□□ -0.11
CSF1P09603 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CSF1P09603 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.36□□□□□ -0.11
CSF1P09603 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 AC006449.6-201ENST00000612330 2296 ntBASIC14.36□□□□□ -0.11
CSF1P09603 Z83836.1-201ENST00000624605 1642 ntBASIC14.36□□□□□ -0.11
CSF1P09603 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.36□□□□□ -0.11
CSF1P09603 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.36□□□□□ -0.11
CSF1P09603 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.36□□□□□ -0.11
CSF1P09603 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.36□□□□□ -0.11
CSF1P09603 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CSF1P09603 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.36□□□□□ -0.11
CSF1P09603 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CSF1P09603 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CSF1P09603 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.36□□□□□ -0.11
CSF1P09603 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.35□□□□□ -0.11
CSF1P09603 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CSF1P09603 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.35□□□□□ -0.11
CSF1P09603 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.35□□□□□ -0.11
CSF1P09603 GGT4P-201ENST00000623672 1708 ntBASIC14.35□□□□□ -0.11
CSF1P09603 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CSF1P09603 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.35□□□□□ -0.11
CSF1P09603 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms