Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM3O75382 AL513480.1-201ENST00000451731 511 ntBASIC15.46■□□□□ 0.07
TRIM3O75382 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.46■□□□□ 0.07
TRIM3O75382 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM3O75382 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.46■□□□□ 0.07
TRIM3O75382 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.46■□□□□ 0.07
TRIM3O75382 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM3O75382 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM3O75382 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM3O75382 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 AC010327.4-202ENST00000591484 748 ntBASIC15.46■□□□□ 0.07
TRIM3O75382 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
TRIM3O75382 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM3O75382 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TRIM3O75382 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM3O75382 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM3O75382 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRIM3O75382 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
TRIM3O75382 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
TRIM3O75382 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM3O75382 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM3O75382 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 AC007950.2-201ENST00000615045 2347 ntBASIC15.45■□□□□ 0.06
TRIM3O75382 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM3O75382 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TRIM3O75382 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM3O75382 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM3O75382 AC074386.1-202ENST00000463561 864 ntBASIC15.45■□□□□ 0.06
TRIM3O75382 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRIM3O75382 AC112482.1-201ENST00000492080 688 ntBASIC15.45■□□□□ 0.06
TRIM3O75382 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM3O75382 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM3O75382 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM3O75382 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM3O75382 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.45■□□□□ 0.06
TRIM3O75382 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIM3O75382 MIR3687-2-201ENST00000577708 61 ntBASIC15.45■□□□□ 0.06
TRIM3O75382 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM3O75382 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM3O75382 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM3O75382 GPALPP1-207ENST00000611650 899 ntBASIC15.45■□□□□ 0.06
TRIM3O75382 MIR3687-1-201ENST00000614492 61 ntBASIC15.45■□□□□ 0.06
TRIM3O75382 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM3O75382 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM3O75382 AC139530.3-201ENST00000620344 690 ntBASIC15.45■□□□□ 0.06
TRIM3O75382 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRIM3O75382 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
TRIM3O75382 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIM3O75382 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRIM3O75382 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 AC008741.2-201ENST00000612792 3115 ntBASIC15.45■□□□□ 0.06
TRIM3O75382 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM3O75382 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRIM3O75382 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM3O75382 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM3O75382 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM3O75382 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM3O75382 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM3O75382 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 CYP2T1P-202ENST00000641596 2535 ntBASIC15.44■□□□□ 0.06
TRIM3O75382 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM3O75382 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM3O75382 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM3O75382 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRIM3O75382 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM3O75382 MIR1233-2-201ENST00000408138 82 ntBASIC15.44■□□□□ 0.06
TRIM3O75382 MIR1233-1-201ENST00000408722 82 ntBASIC15.44■□□□□ 0.06
TRIM3O75382 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
TRIM3O75382 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
TRIM3O75382 AC005412.3-201ENST00000580309 715 ntBASIC15.44■□□□□ 0.06
TRIM3O75382 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM3O75382 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM3O75382 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms