Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.31■□□□□ 0.36
OPHN1O60890 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.31■□□□□ 0.36
OPHN1O60890 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
OPHN1O60890 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
OPHN1O60890 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.3■□□□□ 0.36
OPHN1O60890 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
OPHN1O60890 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.3■□□□□ 0.36
OPHN1O60890 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
OPHN1O60890 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.3■□□□□ 0.36
OPHN1O60890 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.3■□□□□ 0.36
OPHN1O60890 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.3■□□□□ 0.36
OPHN1O60890 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.3■□□□□ 0.36
OPHN1O60890 AC108073.2-201ENST00000464002 357 ntBASIC17.3■□□□□ 0.36
OPHN1O60890 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.3■□□□□ 0.36
OPHN1O60890 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
OPHN1O60890 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.3■□□□□ 0.36
OPHN1O60890 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.3■□□□□ 0.36
OPHN1O60890 AC013467.2-201ENST00000605472 835 ntBASIC17.3■□□□□ 0.36
OPHN1O60890 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.3■□□□□ 0.36
OPHN1O60890 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.3■□□□□ 0.36
OPHN1O60890 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.3■□□□□ 0.36
OPHN1O60890 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.3■□□□□ 0.36
OPHN1O60890 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
OPHN1O60890 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
OPHN1O60890 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
OPHN1O60890 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
OPHN1O60890 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
OPHN1O60890 TOP3BP1-201ENST00000420768 1380 ntBASIC17.29■□□□□ 0.36
OPHN1O60890 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.29■□□□□ 0.36
OPHN1O60890 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
OPHN1O60890 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
OPHN1O60890 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
OPHN1O60890 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.29■□□□□ 0.36
OPHN1O60890 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.29■□□□□ 0.36
OPHN1O60890 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
OPHN1O60890 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
OPHN1O60890 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.29■□□□□ 0.36
OPHN1O60890 ELK2BP-201ENST00000415014 1224 ntBASIC17.29■□□□□ 0.36
OPHN1O60890 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
OPHN1O60890 PRSS29P-201ENST00000440800 595 ntBASIC17.29■□□□□ 0.36
OPHN1O60890 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
OPHN1O60890 HLA-J-202ENST00000469281 1241 ntBASIC17.29■□□□□ 0.36
OPHN1O60890 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.29■□□□□ 0.36
OPHN1O60890 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.29■□□□□ 0.36
OPHN1O60890 AL805961.1-202ENST00000641562 540 ntBASIC17.29■□□□□ 0.36
OPHN1O60890 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
OPHN1O60890 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
OPHN1O60890 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
OPHN1O60890 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
OPHN1O60890 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.29■□□□□ 0.36
OPHN1O60890 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
OPHN1O60890 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
OPHN1O60890 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
OPHN1O60890 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
OPHN1O60890 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.29■□□□□ 0.36
OPHN1O60890 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.29■□□□□ 0.36
OPHN1O60890 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
OPHN1O60890 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
OPHN1O60890 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
OPHN1O60890 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.28■□□□□ 0.36
OPHN1O60890 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
OPHN1O60890 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
OPHN1O60890 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.28■□□□□ 0.36
OPHN1O60890 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
OPHN1O60890 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.28■□□□□ 0.36
OPHN1O60890 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.28■□□□□ 0.36
OPHN1O60890 AC006504.4-201ENST00000592118 1568 ntBASIC17.28■□□□□ 0.36
OPHN1O60890 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.28■□□□□ 0.36
OPHN1O60890 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
OPHN1O60890 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
OPHN1O60890 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
OPHN1O60890 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
OPHN1O60890 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms