Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.59■□□□□ 0.25
PFDN6O15212 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
PFDN6O15212 AL031432.2-201ENST00000566714 459 ntBASIC16.59■□□□□ 0.25
PFDN6O15212 AL928711.1-201ENST00000570165 459 ntBASIC16.59■□□□□ 0.25
PFDN6O15212 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.59■□□□□ 0.25
PFDN6O15212 AC021097.1-201ENST00000607902 574 ntBASIC16.59■□□□□ 0.25
PFDN6O15212 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.59■□□□□ 0.25
PFDN6O15212 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.59■□□□□ 0.25
PFDN6O15212 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.59■□□□□ 0.25
PFDN6O15212 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN6O15212 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN6O15212 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN6O15212 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.59■□□□□ 0.25
PFDN6O15212 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.59■□□□□ 0.25
PFDN6O15212 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN6O15212 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN6O15212 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN6O15212 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PFDN6O15212 AL512652.2-201ENST00000625156 1716 ntBASIC16.59■□□□□ 0.25
PFDN6O15212 LINC01144-201ENST00000626198 1710 ntBASIC16.59■□□□□ 0.25
PFDN6O15212 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN6O15212 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PFDN6O15212 SNX33P1-201ENST00000592116 1762 ntBASIC16.59■□□□□ 0.25
PFDN6O15212 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.58■□□□□ 0.25
PFDN6O15212 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
PFDN6O15212 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PFDN6O15212 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.58■□□□□ 0.25
PFDN6O15212 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PFDN6O15212 NORAD-201ENST00000565493 5339 ntBASIC16.58■□□□□ 0.25
PFDN6O15212 AL671710.1-201ENST00000610245 2349 ntBASIC16.58■□□□□ 0.25
PFDN6O15212 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
PFDN6O15212 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PFDN6O15212 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.58■□□□□ 0.24
PFDN6O15212 MRPL3P1-201ENST00000400109 1033 ntBASIC16.58■□□□□ 0.24
PFDN6O15212 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PFDN6O15212 AC079776.4-201ENST00000511039 504 ntBASIC16.58■□□□□ 0.24
PFDN6O15212 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.58■□□□□ 0.24
PFDN6O15212 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.58■□□□□ 0.24
PFDN6O15212 AC007064.4-201ENST00000637740 555 ntBASIC16.58■□□□□ 0.24
PFDN6O15212 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.58■□□□□ 0.24
PFDN6O15212 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.58■□□□□ 0.24
PFDN6O15212 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 AL031731.1-201ENST00000642131 2094 ntBASIC16.58■□□□□ 0.24
PFDN6O15212 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.58■□□□□ 0.24
PFDN6O15212 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
PFDN6O15212 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.58■□□□□ 0.24
PFDN6O15212 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PFDN6O15212 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.58■□□□□ 0.24
PFDN6O15212 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PFDN6O15212 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 PCDH8P1-201ENST00000428983 2773 ntBASIC16.57■□□□□ 0.24
PFDN6O15212 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.57■□□□□ 0.24
PFDN6O15212 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PFDN6O15212 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.57■□□□□ 0.24
PFDN6O15212 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 GPAA1P2-202ENST00000606848 1787 ntBASIC16.57■□□□□ 0.24
PFDN6O15212 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PFDN6O15212 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.57■□□□□ 0.24
PFDN6O15212 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PFDN6O15212 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.57■□□□□ 0.24
PFDN6O15212 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.57■□□□□ 0.24
PFDN6O15212 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
PFDN6O15212 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PFDN6O15212 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.57■□□□□ 0.24
PFDN6O15212 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.57■□□□□ 0.24
PFDN6O15212 POU5F1P6-201ENST00000466990 990 ntBASIC16.57■□□□□ 0.24
PFDN6O15212 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.57■□□□□ 0.24
PFDN6O15212 RNA5SP415-201ENST00000517246 115 ntBASIC16.57■□□□□ 0.24
PFDN6O15212 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.57■□□□□ 0.24
PFDN6O15212 OR7E47P-204ENST00000575924 449 ntBASIC16.57■□□□□ 0.24
PFDN6O15212 SLC25A6P4-201ENST00000586535 553 ntBASIC16.57■□□□□ 0.24
PFDN6O15212 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.57■□□□□ 0.24
PFDN6O15212 AL049840.3-201ENST00000602669 611 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms