Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.08■□□□□ 0.64
USP17L11C9JVI0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.08■□□□□ 0.64
USP17L11C9JVI0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
USP17L11C9JVI0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 NME2P1-201ENST00000426182 414 ntBASIC19.07■□□□□ 0.64
USP17L11C9JVI0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 AC008738.7-201ENST00000609744 511 ntBASIC19.07■□□□□ 0.64
USP17L11C9JVI0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
USP17L11C9JVI0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 AC106886.4-201ENST00000623557 2502 ntBASIC19.06■□□□□ 0.64
USP17L11C9JVI0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 RN7SL692P-201ENST00000464677 288 ntBASIC19.06■□□□□ 0.64
USP17L11C9JVI0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 AL079307.3-201ENST00000556114 283 ntBASIC19.06■□□□□ 0.64
USP17L11C9JVI0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 AL139011.1-202ENST00000642063 584 ntBASIC19.06■□□□□ 0.64
USP17L11C9JVI0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
USP17L11C9JVI0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 AL512652.2-201ENST00000625156 1716 ntBASIC19.05■□□□□ 0.64
USP17L11C9JVI0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 AP002490.2-201ENST00000524791 560 ntBASIC19.05■□□□□ 0.64
USP17L11C9JVI0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
USP17L11C9JVI0 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms