Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 AC087641.1-201ENST00000557561 1021 ntBASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 AL805961.1-202ENST00000641562 540 ntBASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00959A0A1B0GUT2 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 AC024909.3-201ENST00000611513 2257 ntBASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 SLC25A6P2-201ENST00000497974 877 ntBASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 AC006557.2-201ENST00000592985 1240 ntBASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 GGTLC5P-201ENST00000617623 998 ntBASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 AL603832.2-201ENST00000566195 2125 ntBASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 SLC22A20-204ENST00000530038 1673 ntBASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LINC00959A0A1B0GUT2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms