Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 AC099343.3-201ENST00000605834 2503 ntBASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
LINC01558Q9Y6Z2 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 DUX4L18-201ENST00000553347 1267 ntBASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 AC011298.3-201ENST00000615796 283 ntBASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 AC105206.1-202ENST00000314927 2368 ntBASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 HADH-202ENST00000403312 1752 ntTSL 5 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01558Q9Y6Z2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC8.49□□□□□ -1.05
LINC01558Q9Y6Z2 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC8.49□□□□□ -1.05
LINC01558Q9Y6Z2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
LINC01558Q9Y6Z2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01558Q9Y6Z2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC8.49□□□□□ -1.05
LINC01558Q9Y6Z2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01558Q9Y6Z2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms