Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF6Q9Y4K3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF6Q9Y4K3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF6Q9Y4K3 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF6Q9Y4K3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.16■□□□□ 0.18
TRAF6Q9Y4K3 AL353732.1-201ENST00000569618 1459 ntBASIC16.16■□□□□ 0.18
TRAF6Q9Y4K3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.16■□□□□ 0.18
TRAF6Q9Y4K3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 FGFR3P6-201ENST00000457012 610 ntBASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 AL136379.1-201ENST00000623471 2642 ntBASIC16.15■□□□□ 0.18
TRAF6Q9Y4K3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.18
TRAF6Q9Y4K3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 TSPY26P-202ENST00000565928 3884 ntBASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 AC006504.4-201ENST00000592118 1568 ntBASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 AC010654.1-201ENST00000615722 808 ntBASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 AL805961.1-202ENST00000641562 540 ntBASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TRAF6Q9Y4K3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAF6Q9Y4K3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms