Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 AC006277.1-201ENST00000624348 1610 ntBASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 ACTG1P4-201ENST00000425123 1122 ntBASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 AC011558.1-201ENST00000623459 338 ntBASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
KCNIP3Q9Y2W7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 AC022532.1-201ENST00000624563 1728 ntBASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 SLC25A3P1-201ENST00000443844 931 ntBASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 TSPY15P-201ENST00000457163 923 ntBASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 MIR4497-201ENST00000583208 89 ntBASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 AC124864.1-201ENST00000623408 392 ntBASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KCNIP3Q9Y2W7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.9□□□□□ -0.19
KCNIP3Q9Y2W7 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
KCNIP3Q9Y2W7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.9□□□□□ -0.19
KCNIP3Q9Y2W7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.89□□□□□ -0.19
KCNIP3Q9Y2W7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP3Q9Y2W7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
KCNIP3Q9Y2W7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP3Q9Y2W7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
KCNIP3Q9Y2W7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP3Q9Y2W7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KCNIP3Q9Y2W7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms