Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 BX005266.1-201ENST00000473402 457 ntBASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 AC012313.10-201ENST00000623509 926 ntBASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.16□□□□□ -0.46
HHLA3Q9XRX5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 GPR89P-201ENST00000407924 1495 ntBASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 EGFEM1P-202ENST00000431685 1563 ntBASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 NCF1C-201ENST00000438382 1427 ntBASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 LINC00982-205ENST00000420957 435 ntBASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 IFNL4P1-201ENST00000607083 540 ntBASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.15□□□□□ -0.46
HHLA3Q9XRX5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 1288 ms