Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 AL645933.1-201ENST00000440087 609 ntBASIC6.59□□□□□ -1.35
MACF1Q9UPN3 AC002558.1-201ENST00000488906 803 ntBASIC6.59□□□□□ -1.35
MACF1Q9UPN3 TMA16-204ENST00000508268 608 ntTSL 2 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 AL357563.1-201ENST00000404728 395 ntBASIC6.59□□□□□ -1.35
MACF1Q9UPN3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
MACF1Q9UPN3 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 AC073911.3-201ENST00000624401 631 ntBASIC6.59□□□□□ -1.36
MACF1Q9UPN3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 AIRN-201ENST00000601203 4374 ntBASIC6.59□□□□□ -1.36
MACF1Q9UPN3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 DPM3-202ENST00000368399 517 ntBASIC6.59□□□□□ -1.36
MACF1Q9UPN3 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 DKKL1P1-201ENST00000400550 698 ntBASIC6.59□□□□□ -1.36
MACF1Q9UPN3 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 AC090820.1-201ENST00000519722 591 ntBASIC6.59□□□□□ -1.36
MACF1Q9UPN3 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 AC007663.3-201ENST00000609632 465 ntBASIC6.59□□□□□ -1.36
MACF1Q9UPN3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
MACF1Q9UPN3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 AC005740.2-201ENST00000511085 419 ntBASIC6.58□□□□□ -1.36
MACF1Q9UPN3 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 MIR4754-201ENST00000582477 89 ntBASIC6.58□□□□□ -1.36
MACF1Q9UPN3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 CDK2AP2P3-201ENST00000422476 372 ntBASIC6.58□□□□□ -1.36
MACF1Q9UPN3 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 RPL13AP25-201ENST00000484130 612 ntBASIC6.58□□□□□ -1.36
MACF1Q9UPN3 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 BCL2L12P1-201ENST00000508390 733 ntBASIC6.58□□□□□ -1.36
MACF1Q9UPN3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 AC090510.3-201ENST00000615831 821 ntBASIC6.58□□□□□ -1.36
MACF1Q9UPN3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC6.58□□□□□ -1.36
MACF1Q9UPN3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms