Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 HES4-204ENST00000484667 667 ntTSL 3 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 KRT8P33-201ENST00000508125 1423 ntBASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 AC004854.2-201ENST00000608450 1441 ntBASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC8.37□□□□□ -1.07
CDC42SE1Q9NRR8 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 AC008677.1-201ENST00000519230 1561 ntBASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 HLA-G-202ENST00000376815 851 ntBASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 AC007029.1-201ENST00000604183 313 ntBASIC8.36□□□□□ -1.07
CDC42SE1Q9NRR8 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms