Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 SPCS2P4-201ENST00000436160 681 ntBASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 IGHV3-62-201ENST00000520057 340 ntBASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 AC020765.3-201ENST00000613051 740 ntBASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ATP13A1Q9HD20 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 AC005237.2-201ENST00000434368 219 ntBASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP13A1Q9HD20 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 AC027307.2-201ENST00000591252 911 ntBASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 AC008267.7-201ENST00000624570 1194 ntBASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP13A1Q9HD20 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms